Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TBC1D3FA6NER0 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TBC1D3FA6NER0 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TBC1D3FA6NER0 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TBC1D3FA6NER0 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TBC1D3FA6NER0 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TBC1D3FA6NER0 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TBC1D3FA6NER0 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TBC1D3FA6NER0 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TBC1D3FA6NER0 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TBC1D3FA6NER0 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TBC1D3FA6NER0 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TBC1D3FA6NER0 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.72■□□□□ 0.59
TBC1D3FA6NER0 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TBC1D3FA6NER0 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TBC1D3FA6NER0 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.72■□□□□ 0.59
TBC1D3FA6NER0 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.72■□□□□ 0.59
TBC1D3FA6NER0 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.72■□□□□ 0.59
TBC1D3FA6NER0 AC008556.1-201ENST00000610908 2040 ntBASIC18.72■□□□□ 0.59
TBC1D3FA6NER0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TBC1D3FA6NER0 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TBC1D3FA6NER0 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TBC1D3FA6NER0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TBC1D3FA6NER0 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TBC1D3FA6NER0 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.71■□□□□ 0.59
TBC1D3FA6NER0 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TBC1D3FA6NER0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TBC1D3FA6NER0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.71■□□□□ 0.59
TBC1D3FA6NER0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TBC1D3FA6NER0 AL109659.2-201ENST00000606809 1674 ntBASIC18.71■□□□□ 0.59
TBC1D3FA6NER0 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.71■□□□□ 0.59
TBC1D3FA6NER0 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TBC1D3FA6NER0 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TBC1D3FA6NER0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TBC1D3FA6NER0 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.71■□□□□ 0.59
TBC1D3FA6NER0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TBC1D3FA6NER0 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TBC1D3FA6NER0 IRX1P1-201ENST00000438849 1838 ntBASIC18.71■□□□□ 0.59
TBC1D3FA6NER0 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.71■□□□□ 0.59
TBC1D3FA6NER0 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TBC1D3FA6NER0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TBC1D3FA6NER0 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TBC1D3FA6NER0 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TBC1D3FA6NER0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TBC1D3FA6NER0 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D3FA6NER0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D3FA6NER0 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TBC1D3FA6NER0 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D3FA6NER0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D3FA6NER0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D3FA6NER0 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TBC1D3FA6NER0 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.7■□□□□ 0.58
TBC1D3FA6NER0 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.7■□□□□ 0.58
TBC1D3FA6NER0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D3FA6NER0 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.7■□□□□ 0.58
TBC1D3FA6NER0 SEC1P-202ENST00000473944 940 ntBASIC18.7■□□□□ 0.58
TBC1D3FA6NER0 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.7■□□□□ 0.58
TBC1D3FA6NER0 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.7■□□□□ 0.58
TBC1D3FA6NER0 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.7■□□□□ 0.58
TBC1D3FA6NER0 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.7■□□□□ 0.58
TBC1D3FA6NER0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.7■□□□□ 0.58
TBC1D3FA6NER0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D3FA6NER0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D3FA6NER0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D3FA6NER0 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D3FA6NER0 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.7■□□□□ 0.58
TBC1D3FA6NER0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TBC1D3FA6NER0 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.7■□□□□ 0.58
TBC1D3FA6NER0 AFG3L1P-217ENST00000557444 2447 ntBASIC18.7■□□□□ 0.58
TBC1D3FA6NER0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TBC1D3FA6NER0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D3FA6NER0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D3FA6NER0 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D3FA6NER0 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TBC1D3FA6NER0 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TBC1D3FA6NER0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TBC1D3FA6NER0 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TBC1D3FA6NER0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.69■□□□□ 0.58
TBC1D3FA6NER0 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TBC1D3FA6NER0 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.69■□□□□ 0.58
TBC1D3FA6NER0 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.69■□□□□ 0.58
TBC1D3FA6NER0 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TBC1D3FA6NER0 AL645929.1-201ENST00000420084 975 ntBASIC18.69■□□□□ 0.58
TBC1D3FA6NER0 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.69■□□□□ 0.58
TBC1D3FA6NER0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TBC1D3FA6NER0 HCG4P8-203ENST00000443049 980 ntBASIC18.69■□□□□ 0.58
TBC1D3FA6NER0 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.69■□□□□ 0.58
TBC1D3FA6NER0 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.69■□□□□ 0.58
TBC1D3FA6NER0 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.69■□□□□ 0.58
TBC1D3FA6NER0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.69■□□□□ 0.58
TBC1D3FA6NER0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.69■□□□□ 0.58
TBC1D3FA6NER0 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.69■□□□□ 0.58
TBC1D3FA6NER0 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TBC1D3FA6NER0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.69■□□□□ 0.58
TBC1D3FA6NER0 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TBC1D3FA6NER0 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TBC1D3FA6NER0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TBC1D3FA6NER0 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
TBC1D3FA6NER0 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TBC1D3FA6NER0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms