Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.75■□□□□ 0.11
TRBV6-7A0A0A0MS04 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV6-7A0A0A0MS04 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV6-7A0A0A0MS04 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV6-7A0A0A0MS04 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV6-7A0A0A0MS04 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV6-7A0A0A0MS04 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 LINC00896-202ENST00000609602 2128 ntBASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 MIR935-201ENST00000401179 91 ntBASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 TSPY23P-201ENST00000440136 739 ntBASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 C1QL1P1-201ENST00000568105 661 ntBASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 Six3os1_6.1-201ENST00000620790 196 ntBASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-7A0A0A0MS04 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV6-7A0A0A0MS04 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
TRBV6-7A0A0A0MS04 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
TRBV6-7A0A0A0MS04 AC073592.3-201ENST00000625118 1834 ntBASIC15.73■□□□□ 0.11
TRBV6-7A0A0A0MS04 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV6-7A0A0A0MS04 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC15.73■□□□□ 0.11
TRBV6-7A0A0A0MS04 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
TRBV6-7A0A0A0MS04 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV6-7A0A0A0MS04 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV6-7A0A0A0MS04 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV6-7A0A0A0MS04 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV6-7A0A0A0MS04 NBPF21P-201ENST00000425093 1451 ntBASIC15.73■□□□□ 0.11
TRBV6-7A0A0A0MS04 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV6-7A0A0A0MS04 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC15.73■□□□□ 0.11
TRBV6-7A0A0A0MS04 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC15.73■□□□□ 0.11
TRBV6-7A0A0A0MS04 THEM4-205ENST00000489410 643 ntTSL 2 BASIC15.73■□□□□ 0.11
TRBV6-7A0A0A0MS04 F2R-202ENST00000505600 442 ntTSL 2 BASIC15.73■□□□□ 0.11
TRBV6-7A0A0A0MS04 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC15.73■□□□□ 0.11
TRBV6-7A0A0A0MS04 AC142086.2-201ENST00000569753 217 ntBASIC15.73■□□□□ 0.11
TRBV6-7A0A0A0MS04 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
TRBV6-7A0A0A0MS04 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV6-7A0A0A0MS04 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV6-7A0A0A0MS04 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV6-7A0A0A0MS04 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.73■□□□□ 0.11
TRBV6-7A0A0A0MS04 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV6-7A0A0A0MS04 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.73■□□□□ 0.11
TRBV6-7A0A0A0MS04 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV6-7A0A0A0MS04 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV6-7A0A0A0MS04 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV6-7A0A0A0MS04 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TRBV6-7A0A0A0MS04 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV6-7A0A0A0MS04 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV6-7A0A0A0MS04 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV6-7A0A0A0MS04 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV6-7A0A0A0MS04 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV6-7A0A0A0MS04 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV6-7A0A0A0MS04 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TRBV6-7A0A0A0MS04 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC15.72■□□□□ 0.11
TRBV6-7A0A0A0MS04 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV6-7A0A0A0MS04 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.72■□□□□ 0.11
TRBV6-7A0A0A0MS04 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC15.72■□□□□ 0.11
TRBV6-7A0A0A0MS04 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC15.72■□□□□ 0.11
TRBV6-7A0A0A0MS04 AC004264.1-201ENST00000608354 794 ntBASIC15.72■□□□□ 0.11
TRBV6-7A0A0A0MS04 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV6-7A0A0A0MS04 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV6-7A0A0A0MS04 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV6-7A0A0A0MS04 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.72■□□□□ 0.11
TRBV6-7A0A0A0MS04 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.72■□□□□ 0.11
TRBV6-7A0A0A0MS04 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC15.72■□□□□ 0.11
TRBV6-7A0A0A0MS04 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms