Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 RPS2P52-201ENST00000469610 820 ntBASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV18A0A075B6X5 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV18A0A075B6X5 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV18A0A075B6X5 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV18A0A075B6X5 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.17■□□□□ 0.18
TRAV18A0A075B6X5 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV18A0A075B6X5 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV18A0A075B6X5 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAV18A0A075B6X5 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV18A0A075B6X5 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV18A0A075B6X5 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV18A0A075B6X5 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV18A0A075B6X5 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAV18A0A075B6X5 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV18A0A075B6X5 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV18A0A075B6X5 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TRAV18A0A075B6X5 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.17■□□□□ 0.18
TRAV18A0A075B6X5 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.17■□□□□ 0.18
TRAV18A0A075B6X5 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.17■□□□□ 0.18
TRAV18A0A075B6X5 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC16.17■□□□□ 0.18
TRAV18A0A075B6X5 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAV18A0A075B6X5 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV18A0A075B6X5 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.17■□□□□ 0.18
TRAV18A0A075B6X5 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAV18A0A075B6X5 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV18A0A075B6X5 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV18A0A075B6X5 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV18A0A075B6X5 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV18A0A075B6X5 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TRAV18A0A075B6X5 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV18A0A075B6X5 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.17■□□□□ 0.18
TRAV18A0A075B6X5 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV18A0A075B6X5 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV18A0A075B6X5 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.17■□□□□ 0.18
TRAV18A0A075B6X5 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV18A0A075B6X5 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV18A0A075B6X5 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TRAV18A0A075B6X5 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TRAV18A0A075B6X5 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV18A0A075B6X5 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV18A0A075B6X5 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV18A0A075B6X5 ESPNP-201ENST00000270691 2015 ntBASIC16.16■□□□□ 0.18
TRAV18A0A075B6X5 AC012313.1-201ENST00000593393 3059 ntBASIC16.16■□□□□ 0.18
TRAV18A0A075B6X5 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.16■□□□□ 0.18
TRAV18A0A075B6X5 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV18A0A075B6X5 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV18A0A075B6X5 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.16■□□□□ 0.18
TRAV18A0A075B6X5 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV18A0A075B6X5 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TRAV18A0A075B6X5 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV18A0A075B6X5 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV18A0A075B6X5 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.16■□□□□ 0.18
TRAV18A0A075B6X5 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.16■□□□□ 0.18
TRAV18A0A075B6X5 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV18A0A075B6X5 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.16■□□□□ 0.18
TRAV18A0A075B6X5 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAV18A0A075B6X5 AC006557.6-201ENST00000623071 864 ntBASIC16.16■□□□□ 0.18
TRAV18A0A075B6X5 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV18A0A075B6X5 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV18A0A075B6X5 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.16■□□□□ 0.18
TRAV18A0A075B6X5 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
TRAV18A0A075B6X5 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV18A0A075B6X5 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
TRAV18A0A075B6X5 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TRAV18A0A075B6X5 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV18A0A075B6X5 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV18A0A075B6X5 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TRAV18A0A075B6X5 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV18A0A075B6X5 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms