Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.26■□□□□ 0.83
GTF3C4Q9UKN8 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.26■□□□□ 0.83
GTF3C4Q9UKN8 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.26■□□□□ 0.83
GTF3C4Q9UKN8 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GTF3C4Q9UKN8 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GTF3C4Q9UKN8 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GTF3C4Q9UKN8 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
GTF3C4Q9UKN8 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.26■□□□□ 0.83
GTF3C4Q9UKN8 AC093525.10-201ENST00000625130 1569 ntBASIC20.25■□□□□ 0.83
GTF3C4Q9UKN8 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
GTF3C4Q9UKN8 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GTF3C4Q9UKN8 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.25■□□□□ 0.83
GTF3C4Q9UKN8 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GTF3C4Q9UKN8 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GTF3C4Q9UKN8 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.25■□□□□ 0.83
GTF3C4Q9UKN8 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.25■□□□□ 0.83
GTF3C4Q9UKN8 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
GTF3C4Q9UKN8 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.25■□□□□ 0.83
GTF3C4Q9UKN8 TSPY21P-201ENST00000433481 731 ntBASIC20.25■□□□□ 0.83
GTF3C4Q9UKN8 TSPY17P-201ENST00000450329 467 ntBASIC20.25■□□□□ 0.83
GTF3C4Q9UKN8 AL353719.1-201ENST00000566847 864 ntBASIC20.25■□□□□ 0.83
GTF3C4Q9UKN8 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
GTF3C4Q9UKN8 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
GTF3C4Q9UKN8 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.25■□□□□ 0.83
GTF3C4Q9UKN8 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
GTF3C4Q9UKN8 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
GTF3C4Q9UKN8 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.25■□□□□ 0.83
GTF3C4Q9UKN8 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GTF3C4Q9UKN8 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.25■□□□□ 0.83
GTF3C4Q9UKN8 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GTF3C4Q9UKN8 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
GTF3C4Q9UKN8 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GTF3C4Q9UKN8 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
GTF3C4Q9UKN8 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.24■□□□□ 0.83
GTF3C4Q9UKN8 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GTF3C4Q9UKN8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GTF3C4Q9UKN8 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.24■□□□□ 0.83
GTF3C4Q9UKN8 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GTF3C4Q9UKN8 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GTF3C4Q9UKN8 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GTF3C4Q9UKN8 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GTF3C4Q9UKN8 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
GTF3C4Q9UKN8 MIR1224-201ENST00000408193 85 ntBASIC20.24■□□□□ 0.83
GTF3C4Q9UKN8 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.24■□□□□ 0.83
GTF3C4Q9UKN8 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GTF3C4Q9UKN8 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
GTF3C4Q9UKN8 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
GTF3C4Q9UKN8 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.24■□□□□ 0.83
GTF3C4Q9UKN8 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.24■□□□□ 0.83
GTF3C4Q9UKN8 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
GTF3C4Q9UKN8 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.24■□□□□ 0.83
GTF3C4Q9UKN8 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.24■□□□□ 0.83
GTF3C4Q9UKN8 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GTF3C4Q9UKN8 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GTF3C4Q9UKN8 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GTF3C4Q9UKN8 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.24■□□□□ 0.83
GTF3C4Q9UKN8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GTF3C4Q9UKN8 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.24■□□□□ 0.83
GTF3C4Q9UKN8 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GTF3C4Q9UKN8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
GTF3C4Q9UKN8 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GTF3C4Q9UKN8 AL031598.1-201ENST00000561511 1773 ntBASIC20.23■□□□□ 0.83
GTF3C4Q9UKN8 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
GTF3C4Q9UKN8 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GTF3C4Q9UKN8 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
GTF3C4Q9UKN8 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.23■□□□□ 0.83
GTF3C4Q9UKN8 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
GTF3C4Q9UKN8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GTF3C4Q9UKN8 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GTF3C4Q9UKN8 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GTF3C4Q9UKN8 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.23■□□□□ 0.83
GTF3C4Q9UKN8 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
GTF3C4Q9UKN8 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GTF3C4Q9UKN8 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.23■□□□□ 0.83
GTF3C4Q9UKN8 LIN28AP1-201ENST00000429574 405 ntBASIC20.23■□□□□ 0.83
GTF3C4Q9UKN8 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.23■□□□□ 0.83
GTF3C4Q9UKN8 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.23■□□□□ 0.83
GTF3C4Q9UKN8 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
GTF3C4Q9UKN8 AC010653.2-201ENST00000623505 997 ntBASIC20.23■□□□□ 0.83
GTF3C4Q9UKN8 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
GTF3C4Q9UKN8 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.23■□□□□ 0.83
GTF3C4Q9UKN8 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
GTF3C4Q9UKN8 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
GTF3C4Q9UKN8 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.23■□□□□ 0.83
GTF3C4Q9UKN8 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.22■□□□□ 0.83
GTF3C4Q9UKN8 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GTF3C4Q9UKN8 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
GTF3C4Q9UKN8 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.22■□□□□ 0.83
GTF3C4Q9UKN8 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.22■□□□□ 0.83
GTF3C4Q9UKN8 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GTF3C4Q9UKN8 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
GTF3C4Q9UKN8 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.22■□□□□ 0.83
GTF3C4Q9UKN8 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GTF3C4Q9UKN8 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GTF3C4Q9UKN8 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GTF3C4Q9UKN8 HMGA1P5-201ENST00000412453 271 ntBASIC20.22■□□□□ 0.83
GTF3C4Q9UKN8 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GTF3C4Q9UKN8 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
GTF3C4Q9UKN8 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.22■□□□□ 0.83
GTF3C4Q9UKN8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms