Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 MIGA2-203ENST00000439290 4345 ntTSL 215.77■□□□□ 0.111e-7■■□□□ 14
DROSHAQ9NRR4 STT3A-211ENST00000529196 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.861e-6■■□□□ 14
DROSHAQ9NRR4 STT3A-201ENST00000392708 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.221e-6■■□□□ 14
DROSHAQ9NRR4 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC9.6□□□□□ -0.871e-6■■□□□ 14
DROSHAQ9NRR4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.081e-6■■□□□ 14
DROSHAQ9NRR4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC25.62■■□□□ 1.691e-6■■□□□ 14
DROSHAQ9NRR4 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC23.46■■□□□ 1.354e-13■■□□□ 14
DROSHAQ9NRR4 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC37.21■■■■□ 3.552e-8■■□□□ 14
DROSHAQ9NRR4 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC35.6■■■■□ 3.292e-8■■□□□ 14
DROSHAQ9NRR4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.332e-8■■□□□ 14
DROSHAQ9NRR4 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.552e-8■■□□□ 14
DROSHAQ9NRR4 TRIM41-208ENST00000515499 914 ntTSL 331.88■■■□□ 2.691e-10■■□□□ 14
DROSHAQ9NRR4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC27.69■■■□□ 2.021e-10■■□□□ 14
DROSHAQ9NRR4 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.821e-10■■□□□ 14
DROSHAQ9NRR4 TRIM41-204ENST00000508930 3834 ntTSL 1 (best)19.43■□□□□ 0.71e-10■■□□□ 14
DROSHAQ9NRR4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.782e-6■■□□□ 14
DROSHAQ9NRR4 STK11-207ENST00000589152 3365 ntTSL 219.44■□□□□ 0.72e-6■■□□□ 14
DROSHAQ9NRR4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC26.94■■□□□ 1.91e-6■■□□□ 13.9
DROSHAQ9NRR4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.741e-6■■□□□ 13.9
DROSHAQ9NRR4 MFGE8-205ENST00000558018 1989 ntTSL 225.3■■□□□ 1.641e-6■■□□□ 13.9
DROSHAQ9NRR4 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.391e-6■■□□□ 13.9
DROSHAQ9NRR4 PI4KA-215ENST00000485963 2301 ntTSL 233.95■■■■□ 3.034e-8■■□□□ 13.9
DROSHAQ9NRR4 AURKA-213ENST00000456249 810 ntTSL 228.71■■■□□ 2.199e-9■■□□□ 13.9
DROSHAQ9NRR4 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.089e-9■■□□□ 13.9
DROSHAQ9NRR4 PI4KA-203ENST00000449120 574 ntTSL 427■■□□□ 1.914e-8■■□□□ 13.9
DROSHAQ9NRR4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.875e-6■■□□□ 13.9
DROSHAQ9NRR4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.555e-6■■□□□ 13.9
DROSHAQ9NRR4 AURKA-211ENST00000441357 991 ntTSL 322.55■■□□□ 1.29e-9■■□□□ 13.9
DROSHAQ9NRR4 AURKA-212ENST00000451915 584 ntTSL 319.53■□□□□ 0.729e-9■■□□□ 13.9
DROSHAQ9NRR4 AURKA-209ENST00000420474 879 ntTSL 217.78■□□□□ 0.449e-9■■□□□ 13.9
DROSHAQ9NRR4 AURKA-207ENST00000395914 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.429e-9■■□□□ 13.9
DROSHAQ9NRR4 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.084e-8■■□□□ 13.9
DROSHAQ9NRR4 EIF3B-211ENST00000475415 3745 ntTSL 214.65□□□□□ -0.065e-6■■□□□ 13.9
DROSHAQ9NRR4 AURKA-204ENST00000395907 1902 ntTSL 3 BASIC12.9□□□□□ -0.349e-9■■□□□ 13.9
DROSHAQ9NRR4 AURKA-201ENST00000312783 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.419e-9■■□□□ 13.9
DROSHAQ9NRR4 AURKA-205ENST00000395911 2145 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.59e-9■■□□□ 13.9
DROSHAQ9NRR4 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.599e-9■■□□□ 13.9
DROSHAQ9NRR4 AURKA-203ENST00000371356 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.829e-9■■□□□ 13.9
DROSHAQ9NRR4 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.949e-9■■□□□ 13.9
DROSHAQ9NRR4 CTNNB1-209ENST00000450969 645 ntTSL 45.35□□□□□ -1.554e-11■■□□□ 13.9
DROSHAQ9NRR4 ENTPD6-210ENST00000433417 940 ntTSL 237.53■■■■□ 3.61e-8■■□□□ 13.9
DROSHAQ9NRR4 ENTPD6-215ENST00000471478 991 ntTSL 530.76■■■□□ 2.511e-8■■□□□ 13.9
DROSHAQ9NRR4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC29.64■■■□□ 2.341e-8■■□□□ 13.9
DROSHAQ9NRR4 ENTPD6-213ENST00000447877 932 ntTSL 528.97■■■□□ 2.231e-8■■□□□ 13.9
DROSHAQ9NRR4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC26.69■■□□□ 1.861e-8■■□□□ 13.9
DROSHAQ9NRR4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.851e-8■■□□□ 13.9
DROSHAQ9NRR4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.641e-8■■□□□ 13.9
DROSHAQ9NRR4 ENTPD6-204ENST00000376666 2100 ntTSL 521.48■■□□□ 1.031e-8■■□□□ 13.9
DROSHAQ9NRR4 DOT1L-203ENST00000452696 624 ntTSL 322.77■■□□□ 1.241e-6■■□□□ 13.9
DROSHAQ9NRR4 NAP1L1-222ENST00000551992 1074 ntTSL 537.23■■■■□ 3.551e-8■■□□□ 13.9
DROSHAQ9NRR4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.121e-6■■□□□ 13.9
DROSHAQ9NRR4 NEDD4L-227ENST00000590020 710 ntTSL 320.96■□□□□ 0.951e-7■■□□□ 13.9
DROSHAQ9NRR4 NEDD4L-220ENST00000587881 1984 ntTSL 520.77■□□□□ 0.911e-7■■□□□ 13.9
DROSHAQ9NRR4 NDRG1-204ENST00000517599 2918 ntTSL 217.7■□□□□ 0.421e-6■■□□□ 13.9
DROSHAQ9NRR4 NDRG1-201ENST00000323851 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.161e-6■■□□□ 13.9
DROSHAQ9NRR4 NDRG1-229ENST00000537882 2975 ntTSL 2 BASIC15.44■□□□□ 0.061e-6■■□□□ 13.9
DROSHAQ9NRR4 TBCEL-204ENST00000528512 553 ntTSL 439.76■■■■□ 3.962e-7■■□□□ 13.9
DROSHAQ9NRR4 TBCEL-210ENST00000533712 947 ntTSL 532.09■■■□□ 2.732e-7■■□□□ 13.9
DROSHAQ9NRR4 TBCEL-207ENST00000531148 2593 ntTSL 231.2■■■□□ 2.582e-7■■□□□ 13.9
DROSHAQ9NRR4 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.332e-7■■□□□ 13.9
DROSHAQ9NRR4 TBCEL-201ENST00000284259 3923 ntTSL 1 (best)19.56■□□□□ 0.722e-7■■□□□ 13.9
DROSHAQ9NRR4 TBCEL-202ENST00000422003 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.072e-7■■□□□ 13.9
DROSHAQ9NRR4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC33.77■■■■□ 33e-7■■□□□ 13.9
DROSHAQ9NRR4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.93e-7■■□□□ 13.9
DROSHAQ9NRR4 UQCR11-204ENST00000593029 533 ntTSL 230.39■■■□□ 2.453e-7■■□□□ 13.9
DROSHAQ9NRR4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.183e-7■■□□□ 13.9
DROSHAQ9NRR4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC30.96■■■□□ 2.552e-6■■□□□ 13.9
DROSHAQ9NRR4 SEPT5-207ENST00000431044 3173 ntTSL 1 (best)22.66■■□□□ 1.222e-6■■□□□ 13.9
DROSHAQ9NRR4 AXIN2-206ENST00000580513 1060 ntTSL 238.11■■■■□ 3.693e-6■■□□□ 13.9
DROSHAQ9NRR4 AXIN2-207ENST00000585045 1034 ntTSL 231.62■■■□□ 2.653e-6■■□□□ 13.9
DROSHAQ9NRR4 AXIN2-204ENST00000577278 976 ntTSL 526.23■■□□□ 1.793e-6■■□□□ 13.9
DROSHAQ9NRR4 AXIN2-203ENST00000544103 621 ntTSL 325.34■■□□□ 1.653e-6■■□□□ 13.9
DROSHAQ9NRR4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.243e-6■■□□□ 13.9
DROSHAQ9NRR4 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.857e-10■■□□□ 13.9
DROSHAQ9NRR4 PRMT1-216ENST00000530361 866 ntTSL 327.07■■□□□ 1.923e-8■■□□□ 13.9
DROSHAQ9NRR4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC35.09■■■■□ 3.211e-7■■□□□ 13.9
DROSHAQ9NRR4 SNHG12-201ENST00000461448 1629 ntTSL 1 (best)29.75■■■□□ 2.351e-7■■□□□ 13.9
DROSHAQ9NRR4 SNHG12-203ENST00000464115 712 ntTSL 328.03■■■□□ 2.081e-7■■□□□ 13.9
DROSHAQ9NRR4 SNHG12-208ENST00000481220 751 ntTSL 328.03■■■□□ 2.081e-7■■□□□ 13.9
DROSHAQ9NRR4 SNHG12-206ENST00000474814 1903 ntTSL 226.63■■□□□ 1.851e-7■■□□□ 13.9
DROSHAQ9NRR4 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC23.67■■□□□ 1.381e-7■■□□□ 13.9
DROSHAQ9NRR4 SNHG12-209ENST00000481368 1588 ntTSL 1 (best)22.2■■□□□ 1.151e-7■■□□□ 13.9
DROSHAQ9NRR4 SNHG12-205ENST00000470977 1098 ntTSL 1 (best)21.4■■□□□ 1.021e-7■■□□□ 13.9
DROSHAQ9NRR4 SNHG12-202ENST00000461832 675 ntTSL 221.35■■□□□ 1.011e-7■■□□□ 13.9
DROSHAQ9NRR4 SNHG12-211ENST00000488745 1365 ntTSL 1 (best) BASIC13.05□□□□□ -0.321e-7■■□□□ 13.9
DROSHAQ9NRR4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC33.19■■■□□ 2.95e-6■■□□□ 13.9
DROSHAQ9NRR4 AC233280.19-201ENST00000633223 136 ntBASIC20.73■□□□□ 0.914e-9■■□□□ 13.9
DROSHAQ9NRR4 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.491e-6■■□□□ 13.9
DROSHAQ9NRR4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.843e-6■■□□□ 13.8
DROSHAQ9NRR4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.723e-6■■□□□ 13.8
DROSHAQ9NRR4 SYNJ2-203ENST00000367113 939 ntTSL 212.19□□□□□ -0.463e-7■■□□□ 13.8
DROSHAQ9NRR4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC30.39■■■□□ 2.453e-7■■□□□ 13.8
DROSHAQ9NRR4 AP000553.4-201ENST00000641967 471 ntBASIC18.86■□□□□ 0.612e-6■■□□□ 13.8
DROSHAQ9NRR4 ST3GAL2-203ENST00000561708 581 ntTSL 426.17■■□□□ 1.783e-8■■□□□ 13.8
DROSHAQ9NRR4 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.113e-8■■□□□ 13.8
DROSHAQ9NRR4 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.051e-9■■□□□ 13.8
DROSHAQ9NRR4 MIR140-201ENST00000385282 100 ntBASIC0.31□□□□□ -2.364e-7■■□□□ 13.8
DROSHAQ9NRR4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC35.11■■■■□ 3.214e-6■■□□□ 13.8
DROSHAQ9NRR4 ZNF707-212ENST00000527561 1252 ntTSL 224.6■■□□□ 1.534e-6■■□□□ 13.8
DROSHAQ9NRR4 LINC01524-202ENST00000454600 745 ntTSL 3 BASIC18.7■□□□□ 0.581e-6■■□□□ 13.8
Retrieved 100 of 16,331 protein–RNA pairs in 116.7 ms