Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 AC083880.1-201ENST00000608266 535 ntBASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 HLA-A-209ENST00000638375 975 ntBASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 HEIH-201ENST00000623091 1652 ntBASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 PCDHB18P-201ENST00000524813 2368 ntBASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 AC068880.1-201ENST00000507289 2297 ntBASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 C1QL1P1-201ENST00000568105 661 ntBASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 AC004264.1-201ENST00000608354 794 ntBASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CDC42SE2Q9NRR3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC12.96□□□□□ -0.33
CDC42SE2Q9NRR3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDC42SE2Q9NRR3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CDC42SE2Q9NRR3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDC42SE2Q9NRR3 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC12.96□□□□□ -0.33
CDC42SE2Q9NRR3 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC12.96□□□□□ -0.33
CDC42SE2Q9NRR3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC12.96□□□□□ -0.33
CDC42SE2Q9NRR3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CDC42SE2Q9NRR3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CDC42SE2Q9NRR3 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDC42SE2Q9NRR3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC12.96□□□□□ -0.33
CDC42SE2Q9NRR3 RCC2P6-201ENST00000526625 1557 ntBASIC12.96□□□□□ -0.33
CDC42SE2Q9NRR3 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
CDC42SE2Q9NRR3 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
CDC42SE2Q9NRR3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
CDC42SE2Q9NRR3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms