Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.75■□□□□ 0.75
CD248Q9HCU0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CD248Q9HCU0 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CD248Q9HCU0 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CD248Q9HCU0 RCC2P6-201ENST00000526625 1557 ntBASIC19.74■□□□□ 0.75
CD248Q9HCU0 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CD248Q9HCU0 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CD248Q9HCU0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.74■□□□□ 0.75
CD248Q9HCU0 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CD248Q9HCU0 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.74■□□□□ 0.75
CD248Q9HCU0 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD248Q9HCU0 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD248Q9HCU0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.74■□□□□ 0.75
CD248Q9HCU0 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD248Q9HCU0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CD248Q9HCU0 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CD248Q9HCU0 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CD248Q9HCU0 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CD248Q9HCU0 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CD248Q9HCU0 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CD248Q9HCU0 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
CD248Q9HCU0 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CD248Q9HCU0 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.74■□□□□ 0.75
CD248Q9HCU0 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD248Q9HCU0 AP000692.2-201ENST00000608391 879 ntBASIC19.74■□□□□ 0.75
CD248Q9HCU0 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CD248Q9HCU0 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD248Q9HCU0 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD248Q9HCU0 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.74■□□□□ 0.75
CD248Q9HCU0 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CD248Q9HCU0 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.74■□□□□ 0.75
CD248Q9HCU0 AC104581.1-202ENST00000635932 2618 ntBASIC19.73■□□□□ 0.75
CD248Q9HCU0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CD248Q9HCU0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CD248Q9HCU0 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD248Q9HCU0 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.73■□□□□ 0.75
CD248Q9HCU0 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.73■□□□□ 0.75
CD248Q9HCU0 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CD248Q9HCU0 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD248Q9HCU0 ARMC10P1-201ENST00000313754 855 ntBASIC19.73■□□□□ 0.75
CD248Q9HCU0 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.73■□□□□ 0.75
CD248Q9HCU0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.73■□□□□ 0.75
CD248Q9HCU0 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CD248Q9HCU0 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD248Q9HCU0 AC097488.1-201ENST00000507834 756 ntBASIC19.73■□□□□ 0.75
CD248Q9HCU0 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.73■□□□□ 0.75
CD248Q9HCU0 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
CD248Q9HCU0 FAM87A-204ENST00000613235 858 ntBASIC19.73■□□□□ 0.75
CD248Q9HCU0 AC006011.2-201ENST00000621313 1158 ntBASIC19.73■□□□□ 0.75
CD248Q9HCU0 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD248Q9HCU0 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD248Q9HCU0 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD248Q9HCU0 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD248Q9HCU0 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CD248Q9HCU0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CD248Q9HCU0 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.73■□□□□ 0.75
CD248Q9HCU0 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD248Q9HCU0 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD248Q9HCU0 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD248Q9HCU0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD248Q9HCU0 TMEM179-206ENST00000616017 1645 ntBASIC19.73■□□□□ 0.75
CD248Q9HCU0 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD248Q9HCU0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.72■□□□□ 0.75
CD248Q9HCU0 AL390961.4-201ENST00000623958 2535 ntBASIC19.72■□□□□ 0.75
CD248Q9HCU0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CD248Q9HCU0 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CD248Q9HCU0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CD248Q9HCU0 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CD248Q9HCU0 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD248Q9HCU0 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CD248Q9HCU0 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CD248Q9HCU0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD248Q9HCU0 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD248Q9HCU0 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD248Q9HCU0 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
CD248Q9HCU0 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD248Q9HCU0 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.72■□□□□ 0.75
CD248Q9HCU0 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CD248Q9HCU0 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.72■□□□□ 0.75
CD248Q9HCU0 DUX4L26-201ENST00000489078 1255 ntBASIC19.72■□□□□ 0.75
CD248Q9HCU0 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.72■□□□□ 0.75
CD248Q9HCU0 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CD248Q9HCU0 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.72■□□□□ 0.75
CD248Q9HCU0 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.72■□□□□ 0.75
CD248Q9HCU0 C2orf69P3-201ENST00000565542 1120 ntBASIC19.72■□□□□ 0.75
CD248Q9HCU0 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.72■□□□□ 0.75
CD248Q9HCU0 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
CD248Q9HCU0 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD248Q9HCU0 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.72■□□□□ 0.75
CD248Q9HCU0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
CD248Q9HCU0 BX119927.1-201ENST00000636596 1552 ntBASIC19.72■□□□□ 0.75
CD248Q9HCU0 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD248Q9HCU0 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD248Q9HCU0 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.72■□□□□ 0.75
CD248Q9HCU0 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.72■□□□□ 0.75
CD248Q9HCU0 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD248Q9HCU0 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD248Q9HCU0 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.71■□□□□ 0.75
CD248Q9HCU0 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CD248Q9HCU0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms