Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00479Q96M42 AP006587.1-201ENST00000534129 1502 ntBASIC14.38□□□□□ -0.11
LINC00479Q96M42 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00479Q96M42 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00479Q96M42 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC14.38□□□□□ -0.11
LINC00479Q96M42 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC14.38□□□□□ -0.11
LINC00479Q96M42 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00479Q96M42 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.38□□□□□ -0.11
LINC00479Q96M42 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00479Q96M42 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
LINC00479Q96M42 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00479Q96M42 AL162741.1-201ENST00000565563 1558 ntBASIC14.38□□□□□ -0.11
LINC00479Q96M42 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00479Q96M42 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
LINC00479Q96M42 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00479Q96M42 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
LINC00479Q96M42 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.38□□□□□ -0.11
LINC00479Q96M42 LINC00896-202ENST00000609602 2128 ntBASIC14.38□□□□□ -0.11
LINC00479Q96M42 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00479Q96M42 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00479Q96M42 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LINC00479Q96M42 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC00479Q96M42 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC00479Q96M42 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00479Q96M42 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00479Q96M42 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00479Q96M42 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00479Q96M42 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC14.37□□□□□ -0.11
LINC00479Q96M42 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC14.37□□□□□ -0.11
LINC00479Q96M42 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00479Q96M42 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00479Q96M42 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
LINC00479Q96M42 AC016769.1-201ENST00000409132 1010 ntBASIC14.37□□□□□ -0.11
LINC00479Q96M42 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC00479Q96M42 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00479Q96M42 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC00479Q96M42 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC00479Q96M42 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC00479Q96M42 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00479Q96M42 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00479Q96M42 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
LINC00479Q96M42 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC14.37□□□□□ -0.11
LINC00479Q96M42 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00479Q96M42 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LINC00479Q96M42 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00479Q96M42 AL499627.1-201ENST00000569373 2188 ntBASIC14.37□□□□□ -0.11
LINC00479Q96M42 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC00479Q96M42 AC135776.1-201ENST00000319817 2481 ntBASIC14.37□□□□□ -0.11
LINC00479Q96M42 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
LINC00479Q96M42 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LINC00479Q96M42 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
LINC00479Q96M42 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00479Q96M42 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.37□□□□□ -0.11
LINC00479Q96M42 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00479Q96M42 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00479Q96M42 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC00479Q96M42 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC00479Q96M42 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC14.36□□□□□ -0.11
LINC00479Q96M42 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00479Q96M42 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
LINC00479Q96M42 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00479Q96M42 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00479Q96M42 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00479Q96M42 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC14.36□□□□□ -0.11
LINC00479Q96M42 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
LINC00479Q96M42 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00479Q96M42 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00479Q96M42 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00479Q96M42 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
LINC00479Q96M42 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
LINC00479Q96M42 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00479Q96M42 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC14.36□□□□□ -0.11
LINC00479Q96M42 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC14.36□□□□□ -0.11
LINC00479Q96M42 AC007322.1-201ENST00000426983 750 ntBASIC14.36□□□□□ -0.11
LINC00479Q96M42 AC034268.1-201ENST00000441047 882 ntBASIC14.36□□□□□ -0.11
LINC00479Q96M42 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00479Q96M42 AC005829.2-201ENST00000571422 1056 ntBASIC14.36□□□□□ -0.11
LINC00479Q96M42 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00479Q96M42 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC00479Q96M42 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC14.36□□□□□ -0.11
LINC00479Q96M42 AC005181.1-201ENST00000604782 1256 ntBASIC14.36□□□□□ -0.11
LINC00479Q96M42 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC14.36□□□□□ -0.11
LINC00479Q96M42 PARP1-210ENST00000629232 477 ntTSL 5 BASIC14.36□□□□□ -0.11
LINC00479Q96M42 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC00479Q96M42 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00479Q96M42 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00479Q96M42 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
LINC00479Q96M42 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
LINC00479Q96M42 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
LINC00479Q96M42 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00479Q96M42 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC00479Q96M42 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00479Q96M42 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00479Q96M42 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
LINC00479Q96M42 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00479Q96M42 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00479Q96M42 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
LINC00479Q96M42 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00479Q96M42 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00479Q96M42 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms