Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 AC093787.1-201ENST00000450396 207 ntBASIC18.78■□□□□ 0.6
RAB3IL1Q8TBN0 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB3IL1Q8TBN0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3IL1Q8TBN0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.78■□□□□ 0.6
RAB3IL1Q8TBN0 RAP2CP1-201ENST00000605103 478 ntBASIC18.78■□□□□ 0.6
RAB3IL1Q8TBN0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.78■□□□□ 0.6
RAB3IL1Q8TBN0 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3IL1Q8TBN0 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3IL1Q8TBN0 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3IL1Q8TBN0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3IL1Q8TBN0 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3IL1Q8TBN0 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RAB3IL1Q8TBN0 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.78■□□□□ 0.6
RAB3IL1Q8TBN0 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3IL1Q8TBN0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3IL1Q8TBN0 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3IL1Q8TBN0 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RAB3IL1Q8TBN0 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.78■□□□□ 0.6
RAB3IL1Q8TBN0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB3IL1Q8TBN0 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB3IL1Q8TBN0 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB3IL1Q8TBN0 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB3IL1Q8TBN0 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.77■□□□□ 0.6
RAB3IL1Q8TBN0 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB3IL1Q8TBN0 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.77■□□□□ 0.6
RAB3IL1Q8TBN0 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.77■□□□□ 0.6
RAB3IL1Q8TBN0 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB3IL1Q8TBN0 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.77■□□□□ 0.6
RAB3IL1Q8TBN0 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.77■□□□□ 0.6
RAB3IL1Q8TBN0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.77■□□□□ 0.6
RAB3IL1Q8TBN0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB3IL1Q8TBN0 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB3IL1Q8TBN0 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.77■□□□□ 0.6
RAB3IL1Q8TBN0 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB3IL1Q8TBN0 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
RAB3IL1Q8TBN0 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB3IL1Q8TBN0 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB3IL1Q8TBN0 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB3IL1Q8TBN0 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.77■□□□□ 0.6
RAB3IL1Q8TBN0 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.77■□□□□ 0.6
RAB3IL1Q8TBN0 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RAB3IL1Q8TBN0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RAB3IL1Q8TBN0 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
RAB3IL1Q8TBN0 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
RAB3IL1Q8TBN0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
RAB3IL1Q8TBN0 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RAB3IL1Q8TBN0 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
RAB3IL1Q8TBN0 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
RAB3IL1Q8TBN0 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3IL1Q8TBN0 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3IL1Q8TBN0 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3IL1Q8TBN0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3IL1Q8TBN0 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3IL1Q8TBN0 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3IL1Q8TBN0 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RAB3IL1Q8TBN0 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3IL1Q8TBN0 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3IL1Q8TBN0 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3IL1Q8TBN0 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3IL1Q8TBN0 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3IL1Q8TBN0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3IL1Q8TBN0 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3IL1Q8TBN0 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.76■□□□□ 0.59
RAB3IL1Q8TBN0 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3IL1Q8TBN0 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.76■□□□□ 0.59
RAB3IL1Q8TBN0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3IL1Q8TBN0 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RAB3IL1Q8TBN0 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.76■□□□□ 0.59
RAB3IL1Q8TBN0 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.76■□□□□ 0.59
RAB3IL1Q8TBN0 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.76■□□□□ 0.59
RAB3IL1Q8TBN0 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3IL1Q8TBN0 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3IL1Q8TBN0 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3IL1Q8TBN0 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.75■□□□□ 0.59
RAB3IL1Q8TBN0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.75■□□□□ 0.59
RAB3IL1Q8TBN0 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3IL1Q8TBN0 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3IL1Q8TBN0 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3IL1Q8TBN0 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3IL1Q8TBN0 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3IL1Q8TBN0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3IL1Q8TBN0 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.75■□□□□ 0.59
RAB3IL1Q8TBN0 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.75■□□□□ 0.59
RAB3IL1Q8TBN0 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3IL1Q8TBN0 KRT18P16-201ENST00000510337 1294 ntBASIC18.75■□□□□ 0.59
RAB3IL1Q8TBN0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3IL1Q8TBN0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3IL1Q8TBN0 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.75■□□□□ 0.59
RAB3IL1Q8TBN0 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.75■□□□□ 0.59
RAB3IL1Q8TBN0 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
RAB3IL1Q8TBN0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.75■□□□□ 0.59
RAB3IL1Q8TBN0 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.75■□□□□ 0.59
RAB3IL1Q8TBN0 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3IL1Q8TBN0 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3IL1Q8TBN0 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.75■□□□□ 0.59
RAB3IL1Q8TBN0 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3IL1Q8TBN0 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3IL1Q8TBN0 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3IL1Q8TBN0 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3IL1Q8TBN0 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms