Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RTL9Q8NET4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RTL9Q8NET4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RTL9Q8NET4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC23.18■■□□□ 1.3
RTL9Q8NET4 AL391807.1-203ENST00000604392 2365 ntBASIC23.18■■□□□ 1.3
RTL9Q8NET4 AL158211.5-201ENST00000623583 2518 ntBASIC23.18■■□□□ 1.3
RTL9Q8NET4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
RTL9Q8NET4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC23.17■■□□□ 1.3
RTL9Q8NET4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
RTL9Q8NET4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
RTL9Q8NET4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RTL9Q8NET4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RTL9Q8NET4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
RTL9Q8NET4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RTL9Q8NET4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RTL9Q8NET4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
RTL9Q8NET4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
RTL9Q8NET4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
RTL9Q8NET4 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC23.17■■□□□ 1.3
RTL9Q8NET4 AL162741.1-201ENST00000565563 1558 ntBASIC23.17■■□□□ 1.3
RTL9Q8NET4 MIR3180-4-201ENST00000582223 153 ntBASIC23.17■■□□□ 1.3
RTL9Q8NET4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RTL9Q8NET4 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC23.17■■□□□ 1.3
RTL9Q8NET4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC23.17■■□□□ 1.3
RTL9Q8NET4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
RTL9Q8NET4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RTL9Q8NET4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
RTL9Q8NET4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RTL9Q8NET4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RTL9Q8NET4 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTL9Q8NET4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RTL9Q8NET4 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTL9Q8NET4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTL9Q8NET4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RTL9Q8NET4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC23.16■■□□□ 1.3
RTL9Q8NET4 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC23.16■■□□□ 1.3
RTL9Q8NET4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC23.16■■□□□ 1.3
RTL9Q8NET4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTL9Q8NET4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC23.16■■□□□ 1.3
RTL9Q8NET4 AC011498.5-201ENST00000592027 486 ntBASIC23.16■■□□□ 1.3
RTL9Q8NET4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTL9Q8NET4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTL9Q8NET4 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
RTL9Q8NET4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RTL9Q8NET4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC23.16■■□□□ 1.3
RTL9Q8NET4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
RTL9Q8NET4 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTL9Q8NET4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTL9Q8NET4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC23.16■■□□□ 1.3
RTL9Q8NET4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RTL9Q8NET4 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC23.16■■□□□ 1.3
RTL9Q8NET4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTL9Q8NET4 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC23.16■■□□□ 1.3
RTL9Q8NET4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTL9Q8NET4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTL9Q8NET4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC23.15■■□□□ 1.3
RTL9Q8NET4 AL691432.3-201ENST00000621860 400 ntBASIC23.15■■□□□ 1.3
RTL9Q8NET4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTL9Q8NET4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RTL9Q8NET4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC23.15■■□□□ 1.3
RTL9Q8NET4 AC073130.3-201ENST00000624389 2278 ntBASIC23.15■■□□□ 1.3
RTL9Q8NET4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RTL9Q8NET4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTL9Q8NET4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTL9Q8NET4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RTL9Q8NET4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTL9Q8NET4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTL9Q8NET4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTL9Q8NET4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
RTL9Q8NET4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTL9Q8NET4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RTL9Q8NET4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RTL9Q8NET4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RTL9Q8NET4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC23.14■■□□□ 1.3
RTL9Q8NET4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RTL9Q8NET4 AC246785.2-201ENST00000432512 513 ntBASIC23.14■■□□□ 1.3
RTL9Q8NET4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RTL9Q8NET4 AC034236.2-201ENST00000606662 1610 ntBASIC23.14■■□□□ 1.3
RTL9Q8NET4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
RTL9Q8NET4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC23.14■■□□□ 1.3
RTL9Q8NET4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
RTL9Q8NET4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC23.14■■□□□ 1.29
RTL9Q8NET4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
RTL9Q8NET4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC23.14■■□□□ 1.29
RTL9Q8NET4 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RTL9Q8NET4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC23.14■■□□□ 1.29
RTL9Q8NET4 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RTL9Q8NET4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
RTL9Q8NET4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
RTL9Q8NET4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.29
RTL9Q8NET4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
RTL9Q8NET4 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC23.14■■□□□ 1.29
RTL9Q8NET4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC23.14■■□□□ 1.29
RTL9Q8NET4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC23.14■■□□□ 1.29
RTL9Q8NET4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC23.14■■□□□ 1.29
RTL9Q8NET4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC23.14■■□□□ 1.29
RTL9Q8NET4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
RTL9Q8NET4 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC23.13■■□□□ 1.29
RTL9Q8NET4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC23.13■■□□□ 1.29
RTL9Q8NET4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms