Protein–RNA interactions for Protein: Q8N5G0

SMIM20, Small integral membrane protein 20, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20Q8N5G0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC11.74□□□□□ -0.53
SMIM20Q8N5G0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC11.74□□□□□ -0.53
SMIM20Q8N5G0 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM20Q8N5G0 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM20Q8N5G0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM20Q8N5G0 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM20Q8N5G0 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
SMIM20Q8N5G0 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC11.74□□□□□ -0.53
SMIM20Q8N5G0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM20Q8N5G0 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC11.74□□□□□ -0.53
SMIM20Q8N5G0 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM20Q8N5G0 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM20Q8N5G0 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM20Q8N5G0 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM20Q8N5G0 CHML-205ENST00000638160 705 ntTSL 3 BASIC11.74□□□□□ -0.53
SMIM20Q8N5G0 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM20Q8N5G0 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
SMIM20Q8N5G0 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM20Q8N5G0 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM20Q8N5G0 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC11.74□□□□□ -0.53
SMIM20Q8N5G0 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
SMIM20Q8N5G0 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC11.74□□□□□ -0.53
SMIM20Q8N5G0 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM20Q8N5G0 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC11.74□□□□□ -0.53
SMIM20Q8N5G0 AC015656.1-201ENST00000624209 3578 ntBASIC11.74□□□□□ -0.53
SMIM20Q8N5G0 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM20Q8N5G0 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM20Q8N5G0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM20Q8N5G0 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM20Q8N5G0 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM20Q8N5G0 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM20Q8N5G0 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM20Q8N5G0 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC11.74□□□□□ -0.53
SMIM20Q8N5G0 REXO1L9P-201ENST00000604264 2108 ntBASIC11.74□□□□□ -0.53
SMIM20Q8N5G0 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM20Q8N5G0 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM20Q8N5G0 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC11.74□□□□□ -0.53
SMIM20Q8N5G0 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 MIR600HG-201ENST00000449175 5984 ntBASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 CR383656.2-201ENST00000548656 2254 ntBASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
SMIM20Q8N5G0 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC11.72□□□□□ -0.53
SMIM20Q8N5G0 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SMIM20Q8N5G0 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMIM20Q8N5G0 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC11.72□□□□□ -0.53
SMIM20Q8N5G0 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC11.72□□□□□ -0.53
SMIM20Q8N5G0 AC138969.2-201ENST00000532739 9932 ntBASIC11.72□□□□□ -0.53
SMIM20Q8N5G0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
SMIM20Q8N5G0 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
SMIM20Q8N5G0 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMIM20Q8N5G0 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMIM20Q8N5G0 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMIM20Q8N5G0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC11.72□□□□□ -0.53
SMIM20Q8N5G0 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMIM20Q8N5G0 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
SMIM20Q8N5G0 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SMIM20Q8N5G0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMIM20Q8N5G0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC11.72□□□□□ -0.53
SMIM20Q8N5G0 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC11.72□□□□□ -0.53
SMIM20Q8N5G0 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
SMIM20Q8N5G0 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
SMIM20Q8N5G0 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms