Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
LINC01554Q52M75 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC9.47□□□□□ -0.89
LINC01554Q52M75 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
LINC01554Q52M75 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC9.47□□□□□ -0.89
LINC01554Q52M75 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC9.46□□□□□ -0.89
LINC01554Q52M75 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
LINC01554Q52M75 GATM-206ENST00000558336 1522 ntTSL 2 BASIC9.46□□□□□ -0.89
LINC01554Q52M75 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC9.46□□□□□ -0.89
LINC01554Q52M75 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
LINC01554Q52M75 PARN-205ENST00000539279 1557 ntTSL 2 BASIC9.46□□□□□ -0.89
LINC01554Q52M75 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC9.46□□□□□ -0.89
LINC01554Q52M75 SYT6-210ENST00000641643 1587 ntBASIC9.46□□□□□ -0.89
LINC01554Q52M75 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
LINC01554Q52M75 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
LINC01554Q52M75 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC9.46□□□□□ -0.89
LINC01554Q52M75 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.89
LINC01554Q52M75 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
LINC01554Q52M75 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
LINC01554Q52M75 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
LINC01554Q52M75 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
LINC01554Q52M75 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
LINC01554Q52M75 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
LINC01554Q52M75 DKFZP434A062-201ENST00000573103 5021 ntBASIC9.46□□□□□ -0.89
LINC01554Q52M75 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
LINC01554Q52M75 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
LINC01554Q52M75 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
LINC01554Q52M75 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
LINC01554Q52M75 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
LINC01554Q52M75 PTCHD3P2-201ENST00000424937 1205 ntBASIC9.46□□□□□ -0.9
LINC01554Q52M75 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC9.46□□□□□ -0.9
LINC01554Q52M75 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC9.46□□□□□ -0.9
LINC01554Q52M75 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC9.46□□□□□ -0.9
LINC01554Q52M75 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC9.46□□□□□ -0.9
LINC01554Q52M75 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LINC01554Q52M75 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LINC01554Q52M75 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC9.46□□□□□ -0.9
LINC01554Q52M75 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LINC01554Q52M75 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
LINC01554Q52M75 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC9.46□□□□□ -0.9
LINC01554Q52M75 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.9
LINC01554Q52M75 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LINC01554Q52M75 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC9.46□□□□□ -0.9
LINC01554Q52M75 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
LINC01554Q52M75 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC9.46□□□□□ -0.9
LINC01554Q52M75 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
LINC01554Q52M75 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LINC01554Q52M75 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC9.46□□□□□ -0.9
LINC01554Q52M75 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
LINC01554Q52M75 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC9.46□□□□□ -0.9
LINC01554Q52M75 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LINC01554Q52M75 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
LINC01554Q52M75 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LINC01554Q52M75 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LINC01554Q52M75 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.9
LINC01554Q52M75 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC9.46□□□□□ -0.9
LINC01554Q52M75 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC9.45□□□□□ -0.9
LINC01554Q52M75 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC9.45□□□□□ -0.9
LINC01554Q52M75 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01554Q52M75 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01554Q52M75 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
LINC01554Q52M75 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01554Q52M75 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01554Q52M75 AC006128.1-201ENST00000624704 1661 ntBASIC9.45□□□□□ -0.9
LINC01554Q52M75 BANP-201ENST00000286122 2368 ntTSL 5 BASIC9.45□□□□□ -0.9
LINC01554Q52M75 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01554Q52M75 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01554Q52M75 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC9.45□□□□□ -0.9
LINC01554Q52M75 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01554Q52M75 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC9.45□□□□□ -0.9
LINC01554Q52M75 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01554Q52M75 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01554Q52M75 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01554Q52M75 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC9.45□□□□□ -0.9
LINC01554Q52M75 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC9.45□□□□□ -0.9
LINC01554Q52M75 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01554Q52M75 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01554Q52M75 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01554Q52M75 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01554Q52M75 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01554Q52M75 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01554Q52M75 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC9.45□□□□□ -0.9
LINC01554Q52M75 OR2I1P-207ENST00000453522 948 ntBASIC9.45□□□□□ -0.9
LINC01554Q52M75 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC9.45□□□□□ -0.9
LINC01554Q52M75 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01554Q52M75 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01554Q52M75 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC9.45□□□□□ -0.9
LINC01554Q52M75 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC9.45□□□□□ -0.9
LINC01554Q52M75 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
LINC01554Q52M75 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01554Q52M75 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
LINC01554Q52M75 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01554Q52M75 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01554Q52M75 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01554Q52M75 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01554Q52M75 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
LINC01554Q52M75 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC9.45□□□□□ -0.9
LINC01554Q52M75 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
LINC01554Q52M75 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
LINC01554Q52M75 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01554Q52M75 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms