Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCSMST1Q4G0I0 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.27■□□□□ 0.52
CCSMST1Q4G0I0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.27■□□□□ 0.52
CCSMST1Q4G0I0 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCSMST1Q4G0I0 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCSMST1Q4G0I0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CCSMST1Q4G0I0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.27■□□□□ 0.51
CCSMST1Q4G0I0 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCSMST1Q4G0I0 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.26■□□□□ 0.51
CCSMST1Q4G0I0 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCSMST1Q4G0I0 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCSMST1Q4G0I0 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCSMST1Q4G0I0 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CCSMST1Q4G0I0 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CCSMST1Q4G0I0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCSMST1Q4G0I0 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCSMST1Q4G0I0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.26■□□□□ 0.51
CCSMST1Q4G0I0 AC211429.1-201ENST00000415277 523 ntBASIC18.26■□□□□ 0.51
CCSMST1Q4G0I0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCSMST1Q4G0I0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.26■□□□□ 0.51
CCSMST1Q4G0I0 AC012306.2-201ENST00000609350 630 ntBASIC18.26■□□□□ 0.51
CCSMST1Q4G0I0 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCSMST1Q4G0I0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.26■□□□□ 0.51
CCSMST1Q4G0I0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCSMST1Q4G0I0 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCSMST1Q4G0I0 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCSMST1Q4G0I0 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCSMST1Q4G0I0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCSMST1Q4G0I0 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCSMST1Q4G0I0 AL020996.1-203ENST00000536896 2307 ntBASIC18.26■□□□□ 0.51
CCSMST1Q4G0I0 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.25■□□□□ 0.51
CCSMST1Q4G0I0 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCSMST1Q4G0I0 AC093525.10-201ENST00000625130 1569 ntBASIC18.25■□□□□ 0.51
CCSMST1Q4G0I0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCSMST1Q4G0I0 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCSMST1Q4G0I0 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCSMST1Q4G0I0 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCSMST1Q4G0I0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CCSMST1Q4G0I0 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCSMST1Q4G0I0 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CCSMST1Q4G0I0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.25■□□□□ 0.51
CCSMST1Q4G0I0 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCSMST1Q4G0I0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCSMST1Q4G0I0 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CCSMST1Q4G0I0 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.25■□□□□ 0.51
CCSMST1Q4G0I0 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCSMST1Q4G0I0 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.25■□□□□ 0.51
CCSMST1Q4G0I0 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCSMST1Q4G0I0 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.25■□□□□ 0.51
CCSMST1Q4G0I0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.25■□□□□ 0.51
CCSMST1Q4G0I0 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.25■□□□□ 0.51
CCSMST1Q4G0I0 AC145285.6-201ENST00000604632 637 ntBASIC18.25■□□□□ 0.51
CCSMST1Q4G0I0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
CCSMST1Q4G0I0 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCSMST1Q4G0I0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CCSMST1Q4G0I0 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCSMST1Q4G0I0 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCSMST1Q4G0I0 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CCSMST1Q4G0I0 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.25■□□□□ 0.51
CCSMST1Q4G0I0 AL357033.4-201ENST00000617703 1807 ntBASIC18.25■□□□□ 0.51
CCSMST1Q4G0I0 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CCSMST1Q4G0I0 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCSMST1Q4G0I0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CCSMST1Q4G0I0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.25■□□□□ 0.51
CCSMST1Q4G0I0 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCSMST1Q4G0I0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCSMST1Q4G0I0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CCSMST1Q4G0I0 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCSMST1Q4G0I0 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.24■□□□□ 0.51
CCSMST1Q4G0I0 AL499627.1-201ENST00000569373 2188 ntBASIC18.24■□□□□ 0.51
CCSMST1Q4G0I0 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCSMST1Q4G0I0 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CCSMST1Q4G0I0 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.24■□□□□ 0.51
CCSMST1Q4G0I0 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCSMST1Q4G0I0 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCSMST1Q4G0I0 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.24■□□□□ 0.51
CCSMST1Q4G0I0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.24■□□□□ 0.51
CCSMST1Q4G0I0 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CCSMST1Q4G0I0 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.24■□□□□ 0.51
CCSMST1Q4G0I0 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
CCSMST1Q4G0I0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCSMST1Q4G0I0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCSMST1Q4G0I0 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
CCSMST1Q4G0I0 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCSMST1Q4G0I0 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCSMST1Q4G0I0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.24■□□□□ 0.51
CCSMST1Q4G0I0 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CCSMST1Q4G0I0 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCSMST1Q4G0I0 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCSMST1Q4G0I0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCSMST1Q4G0I0 KRT8P45-201ENST00000414328 1447 ntBASIC18.23■□□□□ 0.51
CCSMST1Q4G0I0 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCSMST1Q4G0I0 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.23■□□□□ 0.51
CCSMST1Q4G0I0 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.23■□□□□ 0.51
CCSMST1Q4G0I0 ANO7L1-203ENST00000602586 1720 ntBASIC18.23■□□□□ 0.51
CCSMST1Q4G0I0 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.23■□□□□ 0.51
CCSMST1Q4G0I0 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCSMST1Q4G0I0 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CCSMST1Q4G0I0 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.23■□□□□ 0.51
CCSMST1Q4G0I0 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms