Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PMS1P54277 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.73■□□□□ 0.91
PMS1P54277 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.73■□□□□ 0.91
PMS1P54277 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PMS1P54277 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PMS1P54277 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PMS1P54277 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PMS1P54277 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PMS1P54277 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.73■□□□□ 0.91
PMS1P54277 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.73■□□□□ 0.91
PMS1P54277 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.73■□□□□ 0.91
PMS1P54277 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PMS1P54277 AL390961.4-201ENST00000623958 2535 ntBASIC20.73■□□□□ 0.91
PMS1P54277 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PMS1P54277 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PMS1P54277 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PMS1P54277 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PMS1P54277 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PMS1P54277 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.72■□□□□ 0.91
PMS1P54277 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
PMS1P54277 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.72■□□□□ 0.91
PMS1P54277 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PMS1P54277 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.72■□□□□ 0.91
PMS1P54277 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PMS1P54277 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PMS1P54277 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PMS1P54277 GCSHP5-201ENST00000443090 522 ntBASIC20.72■□□□□ 0.91
PMS1P54277 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.72■□□□□ 0.91
PMS1P54277 AC142381.4-202ENST00000563973 229 ntBASIC20.72■□□□□ 0.91
PMS1P54277 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.72■□□□□ 0.91
PMS1P54277 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PMS1P54277 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
PMS1P54277 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PMS1P54277 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PMS1P54277 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PMS1P54277 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.72■□□□□ 0.91
PMS1P54277 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PMS1P54277 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PMS1P54277 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.71■□□□□ 0.91
PMS1P54277 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PMS1P54277 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PMS1P54277 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PMS1P54277 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PMS1P54277 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.71■□□□□ 0.91
PMS1P54277 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PMS1P54277 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PMS1P54277 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.71■□□□□ 0.91
PMS1P54277 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PMS1P54277 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PMS1P54277 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.71■□□□□ 0.91
PMS1P54277 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PMS1P54277 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PMS1P54277 FAM207BP-201ENST00000447172 505 ntBASIC20.71■□□□□ 0.91
PMS1P54277 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PMS1P54277 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.71■□□□□ 0.91
PMS1P54277 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.71■□□□□ 0.91
PMS1P54277 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
PMS1P54277 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.71■□□□□ 0.91
PMS1P54277 CD177P1-201ENST00000606252 935 ntBASIC20.71■□□□□ 0.91
PMS1P54277 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PMS1P54277 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
PMS1P54277 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PMS1P54277 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PMS1P54277 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.71■□□□□ 0.91
PMS1P54277 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
PMS1P54277 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PMS1P54277 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PMS1P54277 AL354751.1-201ENST00000412768 1863 ntBASIC20.71■□□□□ 0.91
PMS1P54277 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.71■□□□□ 0.91
PMS1P54277 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.71■□□□□ 0.91
PMS1P54277 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
PMS1P54277 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.7■□□□□ 0.91
PMS1P54277 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
PMS1P54277 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PMS1P54277 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.7■□□□□ 0.9
PMS1P54277 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PMS1P54277 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PMS1P54277 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PMS1P54277 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.7■□□□□ 0.9
PMS1P54277 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PMS1P54277 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PMS1P54277 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PMS1P54277 AL357033.4-201ENST00000617703 1807 ntBASIC20.7■□□□□ 0.9
PMS1P54277 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PMS1P54277 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.7■□□□□ 0.9
PMS1P54277 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.7■□□□□ 0.9
PMS1P54277 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.7■□□□□ 0.9
PMS1P54277 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PMS1P54277 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PMS1P54277 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.7■□□□□ 0.9
PMS1P54277 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PMS1P54277 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PMS1P54277 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PMS1P54277 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PMS1P54277 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.7■□□□□ 0.9
PMS1P54277 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PMS1P54277 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.7■□□□□ 0.9
PMS1P54277 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PMS1P54277 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.69■□□□□ 0.9
PMS1P54277 AC073592.3-201ENST00000625118 1834 ntBASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms