Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 EML3-216ENST00000529309 2909 ntTSL 2 BASIC13.86□□□□□ -0.19
CKS2P33552 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CKS2P33552 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CKS2P33552 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CKS2P33552 RHOF-204ENST00000537265 699 ntTSL 2 BASIC13.86□□□□□ -0.19
CKS2P33552 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CKS2P33552 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CKS2P33552 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CKS2P33552 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CKS2P33552 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CKS2P33552 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CKS2P33552 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC13.86□□□□□ -0.19
CKS2P33552 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CKS2P33552 ESPNP-201ENST00000270691 2015 ntBASIC13.86□□□□□ -0.19
CKS2P33552 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC13.86□□□□□ -0.19
CKS2P33552 SDHAP1-207ENST00000440850 2000 ntBASIC13.86□□□□□ -0.19
CKS2P33552 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CKS2P33552 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CKS2P33552 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CKS2P33552 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CKS2P33552 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CKS2P33552 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CKS2P33552 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CKS2P33552 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CKS2P33552 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CKS2P33552 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC13.86□□□□□ -0.19
CKS2P33552 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CKS2P33552 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CKS2P33552 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CKS2P33552 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CKS2P33552 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CKS2P33552 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC13.85□□□□□ -0.19
CKS2P33552 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CKS2P33552 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC13.85□□□□□ -0.19
CKS2P33552 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CKS2P33552 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CKS2P33552 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CKS2P33552 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CKS2P33552 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CKS2P33552 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC13.85□□□□□ -0.19
CKS2P33552 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC13.85□□□□□ -0.19
CKS2P33552 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC13.85□□□□□ -0.19
CKS2P33552 FEM1AP3-201ENST00000403722 1741 ntBASIC13.85□□□□□ -0.19
CKS2P33552 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC13.85□□□□□ -0.19
CKS2P33552 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC13.85□□□□□ -0.19
CKS2P33552 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CKS2P33552 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CKS2P33552 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CKS2P33552 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CKS2P33552 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC13.85□□□□□ -0.19
CKS2P33552 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CKS2P33552 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CKS2P33552 AC027612.3-201ENST00000413684 1047 ntBASIC13.85□□□□□ -0.19
CKS2P33552 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC13.85□□□□□ -0.19
CKS2P33552 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC13.85□□□□□ -0.19
CKS2P33552 AL162412.1-201ENST00000567129 965 ntBASIC13.85□□□□□ -0.19
CKS2P33552 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
CKS2P33552 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CKS2P33552 AC100791.3-201ENST00000617619 330 ntBASIC13.85□□□□□ -0.19
CKS2P33552 AC083906.6-201ENST00000641366 219 ntBASIC13.85□□□□□ -0.19
CKS2P33552 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CKS2P33552 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC13.85□□□□□ -0.19
CKS2P33552 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CKS2P33552 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CKS2P33552 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC13.85□□□□□ -0.19
CKS2P33552 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CKS2P33552 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
CKS2P33552 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CKS2P33552 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CKS2P33552 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CKS2P33552 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CKS2P33552 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
CKS2P33552 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC13.85□□□□□ -0.19
CKS2P33552 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC13.85□□□□□ -0.19
CKS2P33552 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CKS2P33552 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CKS2P33552 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CKS2P33552 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CKS2P33552 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CKS2P33552 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CKS2P33552 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CKS2P33552 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CKS2P33552 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CKS2P33552 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
CKS2P33552 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC13.84□□□□□ -0.19
CKS2P33552 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CKS2P33552 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CKS2P33552 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CKS2P33552 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CKS2P33552 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC13.84□□□□□ -0.19
CKS2P33552 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC13.84□□□□□ -0.19
CKS2P33552 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CKS2P33552 KRT18P68-201ENST00000392293 1000 ntBASIC13.84□□□□□ -0.19
CKS2P33552 TERF1P5-201ENST00000477545 1207 ntBASIC13.84□□□□□ -0.19
CKS2P33552 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC13.84□□□□□ -0.19
CKS2P33552 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CKS2P33552 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CKS2P33552 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CKS2P33552 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CKS2P33552 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms