Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.33■□□□□ 0.52
EPHA3P29320 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
EPHA3P29320 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
EPHA3P29320 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EPHA3P29320 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EPHA3P29320 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EPHA3P29320 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
EPHA3P29320 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.33■□□□□ 0.52
EPHA3P29320 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EPHA3P29320 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
EPHA3P29320 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
EPHA3P29320 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EPHA3P29320 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EPHA3P29320 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.32■□□□□ 0.52
EPHA3P29320 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHA3P29320 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHA3P29320 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHA3P29320 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.32■□□□□ 0.52
EPHA3P29320 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
EPHA3P29320 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHA3P29320 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHA3P29320 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.32■□□□□ 0.52
EPHA3P29320 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.32■□□□□ 0.52
EPHA3P29320 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.32■□□□□ 0.52
EPHA3P29320 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.32■□□□□ 0.52
EPHA3P29320 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.32■□□□□ 0.52
EPHA3P29320 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.32■□□□□ 0.52
EPHA3P29320 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.32■□□□□ 0.52
EPHA3P29320 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.32■□□□□ 0.52
EPHA3P29320 MYC-209ENST00000641252 345 ntBASIC18.32■□□□□ 0.52
EPHA3P29320 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.32■□□□□ 0.52
EPHA3P29320 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
EPHA3P29320 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.32■□□□□ 0.52
EPHA3P29320 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHA3P29320 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHA3P29320 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.32■□□□□ 0.52
EPHA3P29320 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHA3P29320 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
EPHA3P29320 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHA3P29320 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHA3P29320 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
EPHA3P29320 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
EPHA3P29320 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
EPHA3P29320 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHA3P29320 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHA3P29320 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHA3P29320 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
EPHA3P29320 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHA3P29320 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
EPHA3P29320 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.31■□□□□ 0.52
EPHA3P29320 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
EPHA3P29320 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHA3P29320 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EPHA3P29320 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
EPHA3P29320 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.31■□□□□ 0.52
EPHA3P29320 GUSBP6-202ENST00000438529 1198 ntBASIC18.31■□□□□ 0.52
EPHA3P29320 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.31■□□□□ 0.52
EPHA3P29320 AC097658.1-201ENST00000475555 843 ntBASIC18.31■□□□□ 0.52
EPHA3P29320 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.31■□□□□ 0.52
EPHA3P29320 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
EPHA3P29320 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHA3P29320 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.31■□□□□ 0.52
EPHA3P29320 AC060766.5-201ENST00000590539 871 ntBASIC18.31■□□□□ 0.52
EPHA3P29320 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EPHA3P29320 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHA3P29320 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHA3P29320 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHA3P29320 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHA3P29320 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHA3P29320 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHA3P29320 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EPHA3P29320 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHA3P29320 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.31■□□□□ 0.52
EPHA3P29320 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHA3P29320 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
EPHA3P29320 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHA3P29320 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPHA3P29320 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EPHA3P29320 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.3■□□□□ 0.52
EPHA3P29320 AL162741.1-201ENST00000565563 1558 ntBASIC18.3■□□□□ 0.52
EPHA3P29320 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPHA3P29320 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPHA3P29320 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.3■□□□□ 0.52
EPHA3P29320 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.3■□□□□ 0.52
EPHA3P29320 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPHA3P29320 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPHA3P29320 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
EPHA3P29320 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPHA3P29320 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPHA3P29320 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EPHA3P29320 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.3■□□□□ 0.52
EPHA3P29320 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.3■□□□□ 0.52
EPHA3P29320 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
EPHA3P29320 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPHA3P29320 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.3■□□□□ 0.52
EPHA3P29320 SOX15-203ENST00000570788 1093 ntBASIC18.3■□□□□ 0.52
EPHA3P29320 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.3■□□□□ 0.52
EPHA3P29320 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
EPHA3P29320 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
EPHA3P29320 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms