Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.94■□□□□ 0.62
MMP2P08253 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP2P08253 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.94■□□□□ 0.62
MMP2P08253 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MMP2P08253 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.94■□□□□ 0.62
MMP2P08253 AC073912.3-201ENST00000624414 853 ntBASIC18.94■□□□□ 0.62
MMP2P08253 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.94■□□□□ 0.62
MMP2P08253 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP2P08253 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
MMP2P08253 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
MMP2P08253 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP2P08253 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.94■□□□□ 0.62
MMP2P08253 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.94■□□□□ 0.62
MMP2P08253 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
MMP2P08253 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.94■□□□□ 0.62
MMP2P08253 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP2P08253 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP2P08253 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP2P08253 LINC01568-207ENST00000641790 1380 ntBASIC18.93■□□□□ 0.62
MMP2P08253 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.93■□□□□ 0.62
MMP2P08253 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MMP2P08253 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MMP2P08253 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MMP2P08253 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
MMP2P08253 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
MMP2P08253 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.93■□□□□ 0.62
MMP2P08253 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MMP2P08253 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
MMP2P08253 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MMP2P08253 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MMP2P08253 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
MMP2P08253 AC145285.6-201ENST00000604632 637 ntBASIC18.93■□□□□ 0.62
MMP2P08253 AC012306.2-201ENST00000609350 630 ntBASIC18.93■□□□□ 0.62
MMP2P08253 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
MMP2P08253 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
MMP2P08253 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.93■□□□□ 0.62
MMP2P08253 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
MMP2P08253 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MMP2P08253 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MMP2P08253 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MMP2P08253 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
MMP2P08253 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
MMP2P08253 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
MMP2P08253 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.92■□□□□ 0.62
MMP2P08253 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MMP2P08253 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MMP2P08253 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MMP2P08253 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
MMP2P08253 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
MMP2P08253 MIR564-202ENST00000385049 94 ntBASIC18.92■□□□□ 0.62
MMP2P08253 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.92■□□□□ 0.62
MMP2P08253 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MMP2P08253 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.92■□□□□ 0.62
MMP2P08253 CR769767.2-201ENST00000622735 460 ntBASIC18.92■□□□□ 0.62
MMP2P08253 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
MMP2P08253 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MMP2P08253 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MMP2P08253 AC036111.1-201ENST00000533973 1582 ntBASIC18.92■□□□□ 0.62
MMP2P08253 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MMP2P08253 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
MMP2P08253 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.92■□□□□ 0.62
MMP2P08253 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.92■□□□□ 0.62
MMP2P08253 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.92■□□□□ 0.62
MMP2P08253 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.92■□□□□ 0.62
MMP2P08253 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP2P08253 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP2P08253 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP2P08253 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
MMP2P08253 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP2P08253 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP2P08253 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.91■□□□□ 0.62
MMP2P08253 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP2P08253 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.91■□□□□ 0.62
MMP2P08253 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.91■□□□□ 0.62
MMP2P08253 AC128688.1-201ENST00000487626 519 ntBASIC18.91■□□□□ 0.62
MMP2P08253 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.91■□□□□ 0.62
MMP2P08253 MIR3180-5-201ENST00000583743 153 ntBASIC18.91■□□□□ 0.62
MMP2P08253 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP2P08253 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP2P08253 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP2P08253 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP2P08253 WIZP1-201ENST00000531444 2299 ntBASIC18.91■□□□□ 0.62
MMP2P08253 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.91■□□□□ 0.62
MMP2P08253 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP2P08253 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.91■□□□□ 0.62
MMP2P08253 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP2P08253 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MMP2P08253 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP2P08253 KRT8P45-201ENST00000414328 1447 ntBASIC18.91■□□□□ 0.62
MMP2P08253 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MMP2P08253 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
MMP2P08253 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.9■□□□□ 0.62
MMP2P08253 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
MMP2P08253 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
MMP2P08253 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MMP2P08253 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MMP2P08253 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MMP2P08253 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MMP2P08253 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MMP2P08253 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms