Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 AC092647.4-201ENST00000457211 535 ntBASIC19.4■□□□□ 0.7
TSPAN3O60637 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.4■□□□□ 0.7
TSPAN3O60637 AC087388.1-201ENST00000571370 1112 ntBASIC19.4■□□□□ 0.7
TSPAN3O60637 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.4■□□□□ 0.7
TSPAN3O60637 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.4■□□□□ 0.7
TSPAN3O60637 AL512353.2-201ENST00000448759 1962 ntBASIC19.4■□□□□ 0.7
TSPAN3O60637 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TSPAN3O60637 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TSPAN3O60637 AC005332.7-201ENST00000614046 2005 ntBASIC19.4■□□□□ 0.7
TSPAN3O60637 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TSPAN3O60637 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TSPAN3O60637 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TSPAN3O60637 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.4■□□□□ 0.7
TSPAN3O60637 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
TSPAN3O60637 RCC2P3-201ENST00000418112 1537 ntBASIC19.4■□□□□ 0.7
TSPAN3O60637 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.4■□□□□ 0.7
TSPAN3O60637 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.4■□□□□ 0.7
TSPAN3O60637 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TSPAN3O60637 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TSPAN3O60637 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
TSPAN3O60637 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
TSPAN3O60637 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.39■□□□□ 0.69
TSPAN3O60637 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.39■□□□□ 0.69
TSPAN3O60637 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TSPAN3O60637 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TSPAN3O60637 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.39■□□□□ 0.69
TSPAN3O60637 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TSPAN3O60637 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.39■□□□□ 0.69
TSPAN3O60637 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TSPAN3O60637 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.39■□□□□ 0.69
TSPAN3O60637 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TSPAN3O60637 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.39■□□□□ 0.69
TSPAN3O60637 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TSPAN3O60637 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TSPAN3O60637 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
TSPAN3O60637 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TSPAN3O60637 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TSPAN3O60637 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TSPAN3O60637 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
TSPAN3O60637 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TSPAN3O60637 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TSPAN3O60637 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TSPAN3O60637 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TSPAN3O60637 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.39■□□□□ 0.69
TSPAN3O60637 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
TSPAN3O60637 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TSPAN3O60637 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TSPAN3O60637 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TSPAN3O60637 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TSPAN3O60637 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
TSPAN3O60637 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TSPAN3O60637 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TSPAN3O60637 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TSPAN3O60637 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
TSPAN3O60637 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TSPAN3O60637 AL359075.1-203ENST00000462729 1002 ntBASIC19.38■□□□□ 0.69
TSPAN3O60637 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.38■□□□□ 0.69
TSPAN3O60637 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.38■□□□□ 0.69
TSPAN3O60637 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TSPAN3O60637 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.38■□□□□ 0.69
TSPAN3O60637 GCSHP2-201ENST00000560971 527 ntBASIC19.38■□□□□ 0.69
TSPAN3O60637 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TSPAN3O60637 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
TSPAN3O60637 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.38■□□□□ 0.69
TSPAN3O60637 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.38■□□□□ 0.69
TSPAN3O60637 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TSPAN3O60637 AL031432.5-201ENST00000641059 760 ntBASIC19.38■□□□□ 0.69
TSPAN3O60637 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TSPAN3O60637 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
TSPAN3O60637 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TSPAN3O60637 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
TSPAN3O60637 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TSPAN3O60637 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.37■□□□□ 0.69
TSPAN3O60637 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.37■□□□□ 0.69
TSPAN3O60637 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TSPAN3O60637 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TSPAN3O60637 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TSPAN3O60637 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TSPAN3O60637 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TSPAN3O60637 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.37■□□□□ 0.69
TSPAN3O60637 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TSPAN3O60637 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TSPAN3O60637 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TSPAN3O60637 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TSPAN3O60637 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TSPAN3O60637 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TSPAN3O60637 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TSPAN3O60637 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
TSPAN3O60637 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.37■□□□□ 0.69
TSPAN3O60637 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.37■□□□□ 0.69
TSPAN3O60637 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.37■□□□□ 0.69
TSPAN3O60637 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.37■□□□□ 0.69
TSPAN3O60637 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.37■□□□□ 0.69
TSPAN3O60637 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TSPAN3O60637 AL049812.1-201ENST00000432563 2267 ntBASIC19.37■□□□□ 0.69
TSPAN3O60637 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TSPAN3O60637 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
TSPAN3O60637 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TSPAN3O60637 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TSPAN3O60637 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms