Protein–RNA interactions for Protein: A6NJ08

MBD3L5, Putative methyl-CpG-binding domain protein 3-like 5, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L5A6NJ08 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MBD3L5A6NJ08 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
MBD3L5A6NJ08 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MBD3L5A6NJ08 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
MBD3L5A6NJ08 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
MBD3L5A6NJ08 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.55■□□□□ 0.24
MBD3L5A6NJ08 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.55■□□□□ 0.24
MBD3L5A6NJ08 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MBD3L5A6NJ08 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
MBD3L5A6NJ08 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MBD3L5A6NJ08 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MBD3L5A6NJ08 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
MBD3L5A6NJ08 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.54■□□□□ 0.24
MBD3L5A6NJ08 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
MBD3L5A6NJ08 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.54■□□□□ 0.24
MBD3L5A6NJ08 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
MBD3L5A6NJ08 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.54■□□□□ 0.24
MBD3L5A6NJ08 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MBD3L5A6NJ08 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MBD3L5A6NJ08 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.54■□□□□ 0.24
MBD3L5A6NJ08 HCG4P8-203ENST00000443049 980 ntBASIC16.54■□□□□ 0.24
MBD3L5A6NJ08 MIR3180-4-201ENST00000582223 153 ntBASIC16.54■□□□□ 0.24
MBD3L5A6NJ08 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.54■□□□□ 0.24
MBD3L5A6NJ08 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
MBD3L5A6NJ08 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.54■□□□□ 0.24
MBD3L5A6NJ08 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MBD3L5A6NJ08 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.54■□□□□ 0.24
MBD3L5A6NJ08 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MBD3L5A6NJ08 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.54■□□□□ 0.24
MBD3L5A6NJ08 AC093484.2-201ENST00000580996 2166 ntBASIC16.54■□□□□ 0.24
MBD3L5A6NJ08 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
MBD3L5A6NJ08 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MBD3L5A6NJ08 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.53■□□□□ 0.24
MBD3L5A6NJ08 AL391807.1-203ENST00000604392 2365 ntBASIC16.53■□□□□ 0.24
MBD3L5A6NJ08 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MBD3L5A6NJ08 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.53■□□□□ 0.24
MBD3L5A6NJ08 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MBD3L5A6NJ08 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MBD3L5A6NJ08 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MBD3L5A6NJ08 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MBD3L5A6NJ08 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MBD3L5A6NJ08 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MBD3L5A6NJ08 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.53■□□□□ 0.24
MBD3L5A6NJ08 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MBD3L5A6NJ08 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.53■□□□□ 0.24
MBD3L5A6NJ08 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
MBD3L5A6NJ08 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.53■□□□□ 0.24
MBD3L5A6NJ08 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.53■□□□□ 0.24
MBD3L5A6NJ08 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.53■□□□□ 0.24
MBD3L5A6NJ08 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MBD3L5A6NJ08 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.53■□□□□ 0.24
MBD3L5A6NJ08 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MBD3L5A6NJ08 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
MBD3L5A6NJ08 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MBD3L5A6NJ08 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MBD3L5A6NJ08 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.53■□□□□ 0.24
MBD3L5A6NJ08 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
MBD3L5A6NJ08 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MBD3L5A6NJ08 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
MBD3L5A6NJ08 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
MBD3L5A6NJ08 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
MBD3L5A6NJ08 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.52■□□□□ 0.24
MBD3L5A6NJ08 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MBD3L5A6NJ08 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
MBD3L5A6NJ08 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MBD3L5A6NJ08 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
MBD3L5A6NJ08 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MBD3L5A6NJ08 MIR662-201ENST00000384847 95 ntBASIC16.52■□□□□ 0.24
MBD3L5A6NJ08 KRT18P48-201ENST00000434763 852 ntBASIC16.52■□□□□ 0.24
MBD3L5A6NJ08 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.52■□□□□ 0.24
MBD3L5A6NJ08 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.52■□□□□ 0.24
MBD3L5A6NJ08 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.52■□□□□ 0.24
MBD3L5A6NJ08 AC011498.5-201ENST00000592027 486 ntBASIC16.52■□□□□ 0.24
MBD3L5A6NJ08 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.52■□□□□ 0.24
MBD3L5A6NJ08 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.52■□□□□ 0.24
MBD3L5A6NJ08 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.52■□□□□ 0.24
MBD3L5A6NJ08 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.52■□□□□ 0.24
MBD3L5A6NJ08 AFG3L1P-217ENST00000557444 2447 ntBASIC16.52■□□□□ 0.24
MBD3L5A6NJ08 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
MBD3L5A6NJ08 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
MBD3L5A6NJ08 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MBD3L5A6NJ08 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MBD3L5A6NJ08 AC006333.2-201ENST00000607957 2099 ntBASIC16.52■□□□□ 0.23
MBD3L5A6NJ08 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
MBD3L5A6NJ08 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MBD3L5A6NJ08 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MBD3L5A6NJ08 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MBD3L5A6NJ08 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
MBD3L5A6NJ08 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
MBD3L5A6NJ08 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.51■□□□□ 0.23
MBD3L5A6NJ08 AL162741.1-201ENST00000565563 1558 ntBASIC16.51■□□□□ 0.23
MBD3L5A6NJ08 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MBD3L5A6NJ08 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
MBD3L5A6NJ08 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
MBD3L5A6NJ08 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MBD3L5A6NJ08 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MBD3L5A6NJ08 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MBD3L5A6NJ08 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MBD3L5A6NJ08 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MBD3L5A6NJ08 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms