Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV5-3A0A0A0MS03 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV5-3A0A0A0MS03 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV5-3A0A0A0MS03 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV5-3A0A0A0MS03 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV5-3A0A0A0MS03 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.66■□□□□ 0.42
TRBV5-3A0A0A0MS03 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.66■□□□□ 0.42
TRBV5-3A0A0A0MS03 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV5-3A0A0A0MS03 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV5-3A0A0A0MS03 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV5-3A0A0A0MS03 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV5-3A0A0A0MS03 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.66■□□□□ 0.42
TRBV5-3A0A0A0MS03 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.66■□□□□ 0.42
TRBV5-3A0A0A0MS03 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.66■□□□□ 0.42
TRBV5-3A0A0A0MS03 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.66■□□□□ 0.42
TRBV5-3A0A0A0MS03 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV5-3A0A0A0MS03 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV5-3A0A0A0MS03 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TRBV5-3A0A0A0MS03 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.65■□□□□ 0.42
TRBV5-3A0A0A0MS03 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TRBV5-3A0A0A0MS03 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV5-3A0A0A0MS03 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV5-3A0A0A0MS03 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV5-3A0A0A0MS03 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV5-3A0A0A0MS03 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV5-3A0A0A0MS03 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
TRBV5-3A0A0A0MS03 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.65■□□□□ 0.42
TRBV5-3A0A0A0MS03 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.65■□□□□ 0.42
TRBV5-3A0A0A0MS03 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.65■□□□□ 0.42
TRBV5-3A0A0A0MS03 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.65■□□□□ 0.42
TRBV5-3A0A0A0MS03 MYC-208ENST00000641036 567 ntBASIC17.65■□□□□ 0.42
TRBV5-3A0A0A0MS03 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV5-3A0A0A0MS03 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV5-3A0A0A0MS03 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TRBV5-3A0A0A0MS03 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV5-3A0A0A0MS03 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV5-3A0A0A0MS03 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TRBV5-3A0A0A0MS03 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV5-3A0A0A0MS03 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV5-3A0A0A0MS03 AC093677.2-201ENST00000600169 1863 ntBASIC17.65■□□□□ 0.42
TRBV5-3A0A0A0MS03 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.64■□□□□ 0.42
TRBV5-3A0A0A0MS03 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
TRBV5-3A0A0A0MS03 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRBV5-3A0A0A0MS03 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
TRBV5-3A0A0A0MS03 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.64■□□□□ 0.42
TRBV5-3A0A0A0MS03 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRBV5-3A0A0A0MS03 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.64■□□□□ 0.42
TRBV5-3A0A0A0MS03 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRBV5-3A0A0A0MS03 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV5-3A0A0A0MS03 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV5-3A0A0A0MS03 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.64■□□□□ 0.41
TRBV5-3A0A0A0MS03 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV5-3A0A0A0MS03 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV5-3A0A0A0MS03 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.64■□□□□ 0.41
TRBV5-3A0A0A0MS03 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.64■□□□□ 0.41
TRBV5-3A0A0A0MS03 KRT17P3-201ENST00000420566 1262 ntBASIC17.64■□□□□ 0.41
TRBV5-3A0A0A0MS03 AC026366.1-201ENST00000488803 879 ntBASIC17.64■□□□□ 0.41
TRBV5-3A0A0A0MS03 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.64■□□□□ 0.41
TRBV5-3A0A0A0MS03 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV5-3A0A0A0MS03 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV5-3A0A0A0MS03 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.64■□□□□ 0.41
TRBV5-3A0A0A0MS03 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.64■□□□□ 0.41
TRBV5-3A0A0A0MS03 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV5-3A0A0A0MS03 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.64■□□□□ 0.41
TRBV5-3A0A0A0MS03 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV5-3A0A0A0MS03 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV5-3A0A0A0MS03 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.64■□□□□ 0.41
TRBV5-3A0A0A0MS03 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
TRBV5-3A0A0A0MS03 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.64■□□□□ 0.41
TRBV5-3A0A0A0MS03 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.64■□□□□ 0.41
TRBV5-3A0A0A0MS03 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV5-3A0A0A0MS03 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV5-3A0A0A0MS03 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV5-3A0A0A0MS03 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV5-3A0A0A0MS03 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV5-3A0A0A0MS03 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV5-3A0A0A0MS03 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.63■□□□□ 0.41
TRBV5-3A0A0A0MS03 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV5-3A0A0A0MS03 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.63■□□□□ 0.41
TRBV5-3A0A0A0MS03 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV5-3A0A0A0MS03 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV5-3A0A0A0MS03 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV5-3A0A0A0MS03 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.63■□□□□ 0.41
TRBV5-3A0A0A0MS03 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV5-3A0A0A0MS03 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV5-3A0A0A0MS03 KRASP1-201ENST00000407852 552 ntBASIC17.63■□□□□ 0.41
TRBV5-3A0A0A0MS03 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.63■□□□□ 0.41
TRBV5-3A0A0A0MS03 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
TRBV5-3A0A0A0MS03 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.63■□□□□ 0.41
TRBV5-3A0A0A0MS03 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.63■□□□□ 0.41
TRBV5-3A0A0A0MS03 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV5-3A0A0A0MS03 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.63■□□□□ 0.41
TRBV5-3A0A0A0MS03 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.63■□□□□ 0.41
TRBV5-3A0A0A0MS03 AL023875.1-201ENST00000640777 796 ntBASIC17.63■□□□□ 0.41
TRBV5-3A0A0A0MS03 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
TRBV5-3A0A0A0MS03 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.63■□□□□ 0.41
TRBV5-3A0A0A0MS03 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV5-3A0A0A0MS03 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV5-3A0A0A0MS03 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV5-3A0A0A0MS03 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms