Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC16.83■□□□□ 0.28
SSR3Q9UNL2 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SSR3Q9UNL2 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
SSR3Q9UNL2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.83■□□□□ 0.28
SSR3Q9UNL2 C2orf69P4-201ENST00000565394 541 ntBASIC16.83■□□□□ 0.28
SSR3Q9UNL2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.83■□□□□ 0.28
SSR3Q9UNL2 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
SSR3Q9UNL2 AC134043.2-201ENST00000624206 2238 ntBASIC16.83■□□□□ 0.28
SSR3Q9UNL2 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SSR3Q9UNL2 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SSR3Q9UNL2 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SSR3Q9UNL2 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
SSR3Q9UNL2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.83■□□□□ 0.28
SSR3Q9UNL2 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSR3Q9UNL2 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSR3Q9UNL2 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SSR3Q9UNL2 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSR3Q9UNL2 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSR3Q9UNL2 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.82■□□□□ 0.28
SSR3Q9UNL2 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SSR3Q9UNL2 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.82■□□□□ 0.28
SSR3Q9UNL2 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSR3Q9UNL2 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.82■□□□□ 0.28
SSR3Q9UNL2 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSR3Q9UNL2 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SSR3Q9UNL2 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
SSR3Q9UNL2 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SSR3Q9UNL2 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
SSR3Q9UNL2 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.82■□□□□ 0.28
SSR3Q9UNL2 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSR3Q9UNL2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSR3Q9UNL2 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SSR3Q9UNL2 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSR3Q9UNL2 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.82■□□□□ 0.28
SSR3Q9UNL2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC16.82■□□□□ 0.28
SSR3Q9UNL2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SSR3Q9UNL2 AC013268.1-206ENST00000638368 961 ntBASIC16.82■□□□□ 0.28
SSR3Q9UNL2 AC112229.1-201ENST00000639295 961 ntBASIC16.82■□□□□ 0.28
SSR3Q9UNL2 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSR3Q9UNL2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSR3Q9UNL2 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSR3Q9UNL2 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSR3Q9UNL2 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SSR3Q9UNL2 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SSR3Q9UNL2 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
SSR3Q9UNL2 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSR3Q9UNL2 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSR3Q9UNL2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SSR3Q9UNL2 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSR3Q9UNL2 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SSR3Q9UNL2 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.81■□□□□ 0.28
SSR3Q9UNL2 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSR3Q9UNL2 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSR3Q9UNL2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SSR3Q9UNL2 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSR3Q9UNL2 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SSR3Q9UNL2 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SSR3Q9UNL2 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.81■□□□□ 0.28
SSR3Q9UNL2 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSR3Q9UNL2 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSR3Q9UNL2 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.81■□□□□ 0.28
SSR3Q9UNL2 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSR3Q9UNL2 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
SSR3Q9UNL2 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
SSR3Q9UNL2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SSR3Q9UNL2 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSR3Q9UNL2 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSR3Q9UNL2 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SSR3Q9UNL2 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.81■□□□□ 0.28
SSR3Q9UNL2 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSR3Q9UNL2 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSR3Q9UNL2 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.8■□□□□ 0.28
SSR3Q9UNL2 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SSR3Q9UNL2 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SSR3Q9UNL2 AC008406.3-201ENST00000620001 1374 ntBASIC16.8■□□□□ 0.28
SSR3Q9UNL2 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSR3Q9UNL2 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSR3Q9UNL2 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
SSR3Q9UNL2 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SSR3Q9UNL2 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSR3Q9UNL2 AK1-201ENST00000223836 736 ntTSL 3 BASIC16.8■□□□□ 0.28
SSR3Q9UNL2 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSR3Q9UNL2 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSR3Q9UNL2 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC16.8■□□□□ 0.28
SSR3Q9UNL2 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SSR3Q9UNL2 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.8■□□□□ 0.28
SSR3Q9UNL2 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.8■□□□□ 0.28
SSR3Q9UNL2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.8■□□□□ 0.28
SSR3Q9UNL2 CYP2T3P-201ENST00000601990 817 ntBASIC16.8■□□□□ 0.28
SSR3Q9UNL2 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SSR3Q9UNL2 AC110285.6-201ENST00000617652 491 ntBASIC16.8■□□□□ 0.28
SSR3Q9UNL2 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSR3Q9UNL2 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SSR3Q9UNL2 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SSR3Q9UNL2 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSR3Q9UNL2 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSR3Q9UNL2 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSR3Q9UNL2 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSR3Q9UNL2 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
SSR3Q9UNL2 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms