Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.842e-7■■□□□ 14.1
DROSHAQ9NRR4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC26.13■■□□□ 1.772e-7■■□□□ 14.1
DROSHAQ9NRR4 GUK1-228ENST00000485168 737 ntTSL 325.91■■□□□ 1.742e-7■■□□□ 14.1
DROSHAQ9NRR4 GUK1-237ENST00000495999 555 ntTSL 324.29■■□□□ 1.482e-7■■□□□ 14.1
DROSHAQ9NRR4 GUK1-216ENST00000464858 633 ntTSL 323.7■■□□□ 1.382e-7■■□□□ 14.1
DROSHAQ9NRR4 GUK1-219ENST00000470040 2548 ntTSL 221.44■■□□□ 1.022e-7■■□□□ 14.1
DROSHAQ9NRR4 GUK1-223ENST00000478725 414 ntTSL 321.04■□□□□ 0.962e-7■■□□□ 14.1
DROSHAQ9NRR4 GUK1-232ENST00000486668 738 ntTSL 320.47■□□□□ 0.872e-7■■□□□ 14.1
DROSHAQ9NRR4 ARVCF-207ENST00000473551 2108 ntTSL 228.94■■■□□ 2.223e-6■■□□□ 14.1
DROSHAQ9NRR4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC22.1■■□□□ 1.139e-12■■□□□ 14.1
DROSHAQ9NRR4 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.689e-12■■□□□ 14.1
DROSHAQ9NRR4 CTNNB1-203ENST00000396185 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.429e-12■■□□□ 14.1
DROSHAQ9NRR4 CTNNB1-206ENST00000431914 634 ntTSL 417.48■□□□□ 0.399e-12■■□□□ 14.1
DROSHAQ9NRR4 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.059e-12■■□□□ 14.1
DROSHAQ9NRR4 CTNNB1-204ENST00000405570 2513 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.239e-12■■□□□ 14.1
DROSHAQ9NRR4 CTNNB1-207ENST00000433400 596 ntTSL 46.76□□□□□ -1.339e-12■■□□□ 14.1
DROSHAQ9NRR4 CTNNB1-205ENST00000426215 563 ntTSL 44.56□□□□□ -1.689e-12■■□□□ 14.1
DROSHAQ9NRR4 RABL6-207ENST00000461992 763 ntTSL 1 (best)19.65■□□□□ 0.745e-7■■□□□ 14.1
DROSHAQ9NRR4 UVSSA-202ENST00000389851 12605 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.62e-6■■□□□ 14.1
DROSHAQ9NRR4 MYL12A-212ENST00000608786 738 nt33.43■■■□□ 2.944e-9■■□□□ 14.1
DROSHAQ9NRR4 TCF25-216ENST00000565860 437 ntTSL 328.54■■■□□ 2.164e-9■■□□□ 14.1
DROSHAQ9NRR4 MYL12A-208ENST00000580353 565 ntTSL 224.47■■□□□ 1.514e-9■■□□□ 14.1
DROSHAQ9NRR4 HMGCS1-203ENST00000507004 950 ntTSL 222.27■■□□□ 1.164e-9■■□□□ 14.1
DROSHAQ9NRR4 HMGCS1-204ENST00000507293 708 ntTSL 1 (best)18.11■□□□□ 0.494e-9■■□□□ 14.1
DROSHAQ9NRR4 MYL12A-206ENST00000578611 1004 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.464e-9■■□□□ 14.1
DROSHAQ9NRR4 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.424e-9■■□□□ 14.1
DROSHAQ9NRR4 MYL12A-207ENST00000579226 947 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.354e-9■■□□□ 14.1
DROSHAQ9NRR4 MYL12A-210ENST00000583449 334 ntTSL 216.61■□□□□ 0.254e-9■■□□□ 14.1
DROSHAQ9NRR4 MYL12A-211ENST00000585090 614 ntTSL 316.2■□□□□ 0.184e-9■■□□□ 14.1
DROSHAQ9NRR4 MYL12A-201ENST00000217652 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.134e-9■■□□□ 14.1
DROSHAQ9NRR4 HMGCS1-202ENST00000433297 3466 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.074e-9■■□□□ 14.1
DROSHAQ9NRR4 GUK1-234ENST00000492871 1065 ntTSL 339.75■■■■□ 3.951e-7■■□□□ 14.1
DROSHAQ9NRR4 GUK1-215ENST00000462807 628 ntTSL 239.46■■■■□ 3.911e-7■■□□□ 14.1
DROSHAQ9NRR4 GUK1-227ENST00000485083 871 ntTSL 338.63■■■■□ 3.771e-7■■□□□ 14.1
DROSHAQ9NRR4 GUK1-235ENST00000493138 694 ntTSL 338.63■■■■□ 3.771e-7■■□□□ 14.1
DROSHAQ9NRR4 GUK1-208ENST00000366728 842 ntTSL 2 BASIC37.61■■■■□ 3.611e-7■■□□□ 14.1
DROSHAQ9NRR4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC35.08■■■■□ 3.211e-7■■□□□ 14.1
DROSHAQ9NRR4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC33.55■■■□□ 2.961e-7■■□□□ 14.1
DROSHAQ9NRR4 GUK1-213ENST00000453943 656 ntTSL 1 (best)33.09■■■□□ 2.891e-7■■□□□ 14.1
DROSHAQ9NRR4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC31.9■■■□□ 2.71e-7■■□□□ 14.1
DROSHAQ9NRR4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC31.74■■■□□ 2.671e-7■■□□□ 14.1
DROSHAQ9NRR4 GUK1-236ENST00000493209 735 ntTSL 530.68■■■□□ 2.51e-7■■□□□ 14.1
DROSHAQ9NRR4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC29.19■■■□□ 2.261e-7■■□□□ 14.1
DROSHAQ9NRR4 GUK1-230ENST00000485838 774 ntTSL 328.8■■■□□ 2.21e-7■■□□□ 14.1
DROSHAQ9NRR4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC25.69■■□□□ 1.71e-7■■□□□ 14.1
DROSHAQ9NRR4 GUK1-238ENST00000498092 865 ntTSL 523.66■■□□□ 1.381e-7■■□□□ 14.1
DROSHAQ9NRR4 GUK1-206ENST00000366723 845 ntTSL 5 BASIC23.31■■□□□ 1.321e-7■■□□□ 14.1
DROSHAQ9NRR4 GUK1-212ENST00000435153 865 ntTSL 319.45■□□□□ 0.71e-7■■□□□ 14.1
DROSHAQ9NRR4 RANBP1-213ENST00000486575 2177 ntTSL 231.23■■■□□ 2.591e-12■■□□□ 14.1
DROSHAQ9NRR4 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC21.08■□□□□ 0.965e-13■■□□□ 14.1
DROSHAQ9NRR4 PPIA-210ENST00000620047 827 ntTSL 5 BASIC21.08■□□□□ 0.965e-13■■□□□ 14.1
DROSHAQ9NRR4 PPIA-208ENST00000489459 907 ntTSL 2 BASIC21.08■□□□□ 0.965e-13■■□□□ 14.1
DROSHAQ9NRR4 PPIA-205ENST00000479021 552 ntTSL 416.13■□□□□ 0.175e-13■■□□□ 14.1
DROSHAQ9NRR4 PPIA-202ENST00000415933 863 ntTSL 215.52■□□□□ 0.085e-13■■□□□ 14.1
DROSHAQ9NRR4 PPIA-204ENST00000468812 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.515e-13■■□□□ 14.1
DROSHAQ9NRR4 PPIA-203ENST00000451562 544 ntTSL 2 BASIC11.75□□□□□ -0.535e-13■■□□□ 14.1
DROSHAQ9NRR4 PPIA-207ENST00000481437 570 ntTSL 211.75□□□□□ -0.535e-13■■□□□ 14.1
DROSHAQ9NRR4 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC19.75■□□□□ 0.752e-6■■□□□ 14.1
DROSHAQ9NRR4 MAN2C1-212ENST00000563441 2664 ntTSL 1 (best)18.23■□□□□ 0.512e-6■■□□□ 14.1
DROSHAQ9NRR4 MAN2C1-220ENST00000564785 4820 ntTSL 517.99■□□□□ 0.472e-6■■□□□ 14.1
DROSHAQ9NRR4 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC17.14■□□□□ 0.332e-6■■□□□ 14.1
DROSHAQ9NRR4 MAN2C1-224ENST00000565683 3300 ntTSL 1 (best) BASIC17.07■□□□□ 0.322e-6■■□□□ 14.1
DROSHAQ9NRR4 MAN2C1-201ENST00000267978 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.232e-6■■□□□ 14.1
DROSHAQ9NRR4 TCF25-208ENST00000563032 274 ntTSL 231.43■■■□□ 2.626e-6■■□□□ 14.1
DROSHAQ9NRR4 TCF25-212ENST00000564652 860 ntTSL 331.03■■■□□ 2.566e-6■■□□□ 14.1
DROSHAQ9NRR4 TCF25-203ENST00000561585 981 ntTSL 227.04■■□□□ 1.926e-6■■□□□ 14.1
DROSHAQ9NRR4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC27■■□□□ 1.916e-6■■□□□ 14.1
DROSHAQ9NRR4 TCF25-214ENST00000565196 655 ntTSL 525.73■■□□□ 1.716e-6■■□□□ 14.1
DROSHAQ9NRR4 GET4-203ENST00000412734 873 ntTSL 223.51■■□□□ 1.352e-6■■□□□ 14.1
DROSHAQ9NRR4 AC004678.1-201ENST00000615016 929 ntBASIC14.52□□□□□ -0.085e-7■■□□□ 14.1
DROSHAQ9NRR4 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC46.78■■■■■ 5.084e-7■■□□□ 14.1
DROSHAQ9NRR4 CYBA-203ENST00000562209 624 ntTSL 530.54■■■□□ 2.484e-7■■□□□ 14.1
DROSHAQ9NRR4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC26.44■■□□□ 1.824e-7■■□□□ 14.1
DROSHAQ9NRR4 CYBA-202ENST00000561972 464 ntTSL 324.38■■□□□ 1.494e-7■■□□□ 14.1
DROSHAQ9NRR4 CYBA-204ENST00000563526 1052 ntTSL 223.9■■□□□ 1.424e-7■■□□□ 14.1
DROSHAQ9NRR4 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC22.63■■□□□ 1.214e-7■■□□□ 14.1
DROSHAQ9NRR4 CYBA-207ENST00000566534 1006 ntTSL 521.75■■□□□ 1.074e-7■■□□□ 14.1
DROSHAQ9NRR4 CYBA-209ENST00000568278 439 ntTSL 519.99■□□□□ 0.794e-7■■□□□ 14.1
DROSHAQ9NRR4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.511e-8■■□□□ 14
DROSHAQ9NRR4 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC23.59■■□□□ 1.371e-8■■□□□ 14
DROSHAQ9NRR4 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.981e-8■■□□□ 14
DROSHAQ9NRR4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.695e-7■■□□□ 14
DROSHAQ9NRR4 AGAP3-221ENST00000490097 604 ntTSL 422.94■■□□□ 1.262e-6■■□□□ 14
DROSHAQ9NRR4 ARID3A-205ENST00000587532 1016 ntTSL 529.09■■■□□ 2.254e-9■■□□□ 14
DROSHAQ9NRR4 ARID3A-202ENST00000457152 549 ntTSL 520.83■□□□□ 0.924e-9■■□□□ 14
DROSHAQ9NRR4 ATXN1-204ENST00000473388 1569 ntTSL 1 (best)11.95□□□□□ -0.53e-8■■□□□ 14
DROSHAQ9NRR4 ATXN1-202ENST00000436367 10587 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.53e-8■■□□□ 14
DROSHAQ9NRR4 ATXN1-210ENST00000498374 1648 ntTSL 1 (best)10.7□□□□□ -0.73e-8■■□□□ 14
DROSHAQ9NRR4 ATXN1-205ENST00000479680 568 ntTSL 410.65□□□□□ -0.73e-8■■□□□ 14
DROSHAQ9NRR4 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.783e-8■■□□□ 14
DROSHAQ9NRR4 ATXN1-207ENST00000483954 744 ntTSL 37.28□□□□□ -1.243e-8■■□□□ 14
DROSHAQ9NRR4 ATXN1-208ENST00000492857 647 ntTSL 46.95□□□□□ -1.33e-8■■□□□ 14
DROSHAQ9NRR4 ATXN1-203ENST00000467008 3362 ntTSL 1 (best)3.99□□□□□ -1.773e-8■■□□□ 14
DROSHAQ9NRR4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC33.37■■■□□ 2.931e-6■■□□□ 14
DROSHAQ9NRR4 SUN1-222ENST00000457861 2975 ntTSL 221.83■■□□□ 1.091e-6■■□□□ 14
DROSHAQ9NRR4 MIB2-212ENST00000486072 568 ntTSL 333.37■■■□□ 2.932e-29■■□□□ 14
DROSHAQ9NRR4 MIB2-229ENST00000514234 2562 ntTSL 226.74■■□□□ 1.872e-29■■□□□ 14
DROSHAQ9NRR4 MIGA2-210ENST00000483458 2532 ntTSL 225.36■■□□□ 1.651e-7■■□□□ 14
DROSHAQ9NRR4 MIGA2-204ENST00000445183 3598 ntTSL 217.67■□□□□ 0.421e-7■■□□□ 14
DROSHAQ9NRR4 MIGA2-201ENST00000358369 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.351e-7■■□□□ 14
Retrieved 100 of 16,331 protein–RNA pairs in 124.6 ms