Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
NEUROD4Q9HD90 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NEUROD4Q9HD90 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.81■□□□□ 0.44
NEUROD4Q9HD90 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.81■□□□□ 0.44
NEUROD4Q9HD90 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NEUROD4Q9HD90 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
NEUROD4Q9HD90 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NEUROD4Q9HD90 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NEUROD4Q9HD90 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
NEUROD4Q9HD90 KRT16P1-201ENST00000399124 1418 ntBASIC17.81■□□□□ 0.44
NEUROD4Q9HD90 KRT8P11-201ENST00000409686 1436 ntBASIC17.81■□□□□ 0.44
NEUROD4Q9HD90 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NEUROD4Q9HD90 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NEUROD4Q9HD90 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
NEUROD4Q9HD90 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NEUROD4Q9HD90 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NEUROD4Q9HD90 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NEUROD4Q9HD90 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NEUROD4Q9HD90 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NEUROD4Q9HD90 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NEUROD4Q9HD90 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NEUROD4Q9HD90 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
NEUROD4Q9HD90 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NEUROD4Q9HD90 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
NEUROD4Q9HD90 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NEUROD4Q9HD90 RARRES2P10-201ENST00000564312 460 ntBASIC17.8■□□□□ 0.44
NEUROD4Q9HD90 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.8■□□□□ 0.44
NEUROD4Q9HD90 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.8■□□□□ 0.44
NEUROD4Q9HD90 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.8■□□□□ 0.44
NEUROD4Q9HD90 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NEUROD4Q9HD90 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NEUROD4Q9HD90 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NEUROD4Q9HD90 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NEUROD4Q9HD90 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NEUROD4Q9HD90 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
NEUROD4Q9HD90 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
NEUROD4Q9HD90 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NEUROD4Q9HD90 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
NEUROD4Q9HD90 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NEUROD4Q9HD90 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
NEUROD4Q9HD90 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NEUROD4Q9HD90 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
NEUROD4Q9HD90 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NEUROD4Q9HD90 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NEUROD4Q9HD90 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
NEUROD4Q9HD90 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
NEUROD4Q9HD90 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.79■□□□□ 0.44
NEUROD4Q9HD90 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NEUROD4Q9HD90 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NEUROD4Q9HD90 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NEUROD4Q9HD90 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NEUROD4Q9HD90 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.79■□□□□ 0.44
NEUROD4Q9HD90 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NEUROD4Q9HD90 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NEUROD4Q9HD90 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NEUROD4Q9HD90 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
NEUROD4Q9HD90 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.79■□□□□ 0.44
NEUROD4Q9HD90 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.79■□□□□ 0.44
NEUROD4Q9HD90 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.79■□□□□ 0.44
NEUROD4Q9HD90 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.79■□□□□ 0.44
NEUROD4Q9HD90 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.79■□□□□ 0.44
NEUROD4Q9HD90 AL359736.2-201ENST00000621992 437 ntBASIC17.79■□□□□ 0.44
NEUROD4Q9HD90 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NEUROD4Q9HD90 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NEUROD4Q9HD90 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.79■□□□□ 0.44
NEUROD4Q9HD90 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.79■□□□□ 0.44
NEUROD4Q9HD90 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
NEUROD4Q9HD90 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NEUROD4Q9HD90 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.79■□□□□ 0.44
NEUROD4Q9HD90 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NEUROD4Q9HD90 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.79■□□□□ 0.44
NEUROD4Q9HD90 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NEUROD4Q9HD90 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.79■□□□□ 0.44
NEUROD4Q9HD90 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.79■□□□□ 0.44
NEUROD4Q9HD90 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NEUROD4Q9HD90 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
NEUROD4Q9HD90 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.78■□□□□ 0.44
NEUROD4Q9HD90 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NEUROD4Q9HD90 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
NEUROD4Q9HD90 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
NEUROD4Q9HD90 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
NEUROD4Q9HD90 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NEUROD4Q9HD90 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.78■□□□□ 0.44
NEUROD4Q9HD90 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NEUROD4Q9HD90 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NEUROD4Q9HD90 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.78■□□□□ 0.44
NEUROD4Q9HD90 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
NEUROD4Q9HD90 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.78■□□□□ 0.44
NEUROD4Q9HD90 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.78■□□□□ 0.44
NEUROD4Q9HD90 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NEUROD4Q9HD90 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
NEUROD4Q9HD90 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NEUROD4Q9HD90 AC004951.3-201ENST00000418645 1148 ntBASIC17.78■□□□□ 0.44
NEUROD4Q9HD90 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NEUROD4Q9HD90 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NEUROD4Q9HD90 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.78■□□□□ 0.44
NEUROD4Q9HD90 RPPH1-201ENST00000516869 333 ntBASIC17.78■□□□□ 0.44
NEUROD4Q9HD90 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.78■□□□□ 0.44
NEUROD4Q9HD90 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.78■□□□□ 0.44
NEUROD4Q9HD90 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms