Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPPED1Q9BRF8 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPPED1Q9BRF8 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CPPED1Q9BRF8 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CPPED1Q9BRF8 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.75■□□□□ 0.43
CPPED1Q9BRF8 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPPED1Q9BRF8 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CPPED1Q9BRF8 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPPED1Q9BRF8 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.75■□□□□ 0.43
CPPED1Q9BRF8 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CPPED1Q9BRF8 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPPED1Q9BRF8 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.74■□□□□ 0.43
CPPED1Q9BRF8 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.74■□□□□ 0.43
CPPED1Q9BRF8 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPPED1Q9BRF8 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.74■□□□□ 0.43
CPPED1Q9BRF8 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPPED1Q9BRF8 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CPPED1Q9BRF8 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPPED1Q9BRF8 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.74■□□□□ 0.43
CPPED1Q9BRF8 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPPED1Q9BRF8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPPED1Q9BRF8 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPPED1Q9BRF8 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPPED1Q9BRF8 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPPED1Q9BRF8 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.74■□□□□ 0.43
CPPED1Q9BRF8 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CPPED1Q9BRF8 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.74■□□□□ 0.43
CPPED1Q9BRF8 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPPED1Q9BRF8 AC142086.2-201ENST00000569753 217 ntBASIC17.74■□□□□ 0.43
CPPED1Q9BRF8 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPPED1Q9BRF8 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPPED1Q9BRF8 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.74■□□□□ 0.43
CPPED1Q9BRF8 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPPED1Q9BRF8 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPPED1Q9BRF8 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.74■□□□□ 0.43
CPPED1Q9BRF8 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
CPPED1Q9BRF8 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPPED1Q9BRF8 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPPED1Q9BRF8 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPPED1Q9BRF8 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPPED1Q9BRF8 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPPED1Q9BRF8 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPPED1Q9BRF8 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.73■□□□□ 0.43
CPPED1Q9BRF8 AIRN-201ENST00000601203 4374 ntBASIC17.73■□□□□ 0.43
CPPED1Q9BRF8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPPED1Q9BRF8 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPPED1Q9BRF8 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CPPED1Q9BRF8 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CPPED1Q9BRF8 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CPPED1Q9BRF8 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CPPED1Q9BRF8 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPPED1Q9BRF8 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPPED1Q9BRF8 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPPED1Q9BRF8 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CPPED1Q9BRF8 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.73■□□□□ 0.43
CPPED1Q9BRF8 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
CPPED1Q9BRF8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.73■□□□□ 0.43
CPPED1Q9BRF8 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.73■□□□□ 0.43
CPPED1Q9BRF8 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPPED1Q9BRF8 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPPED1Q9BRF8 AC008403.3-201ENST00000598924 454 ntBASIC17.73■□□□□ 0.43
CPPED1Q9BRF8 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPPED1Q9BRF8 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.73■□□□□ 0.43
CPPED1Q9BRF8 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPPED1Q9BRF8 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPPED1Q9BRF8 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.73■□□□□ 0.43
CPPED1Q9BRF8 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
CPPED1Q9BRF8 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPPED1Q9BRF8 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPPED1Q9BRF8 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPPED1Q9BRF8 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CPPED1Q9BRF8 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPPED1Q9BRF8 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPPED1Q9BRF8 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.72■□□□□ 0.43
CPPED1Q9BRF8 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPPED1Q9BRF8 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.72■□□□□ 0.43
CPPED1Q9BRF8 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.72■□□□□ 0.43
CPPED1Q9BRF8 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.72■□□□□ 0.43
CPPED1Q9BRF8 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.72■□□□□ 0.43
CPPED1Q9BRF8 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPPED1Q9BRF8 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
CPPED1Q9BRF8 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.72■□□□□ 0.43
CPPED1Q9BRF8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPPED1Q9BRF8 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPPED1Q9BRF8 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.71■□□□□ 0.43
CPPED1Q9BRF8 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.71■□□□□ 0.43
CPPED1Q9BRF8 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPPED1Q9BRF8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPPED1Q9BRF8 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.71■□□□□ 0.43
CPPED1Q9BRF8 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPPED1Q9BRF8 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPPED1Q9BRF8 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPPED1Q9BRF8 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPPED1Q9BRF8 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPPED1Q9BRF8 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.71■□□□□ 0.43
CPPED1Q9BRF8 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.71■□□□□ 0.43
CPPED1Q9BRF8 MTDHP1-201ENST00000605323 784 ntBASIC17.71■□□□□ 0.43
CPPED1Q9BRF8 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.71■□□□□ 0.43
CPPED1Q9BRF8 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPPED1Q9BRF8 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms