Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM9SF2Q99805 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.48■□□□□ 0.39
TM9SF2Q99805 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
TM9SF2Q99805 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TM9SF2Q99805 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM9SF2Q99805 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.48■□□□□ 0.39
TM9SF2Q99805 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TM9SF2Q99805 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TM9SF2Q99805 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
TM9SF2Q99805 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
TM9SF2Q99805 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TM9SF2Q99805 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.48■□□□□ 0.39
TM9SF2Q99805 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM9SF2Q99805 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TM9SF2Q99805 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.48■□□□□ 0.39
TM9SF2Q99805 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TM9SF2Q99805 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.48■□□□□ 0.39
TM9SF2Q99805 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TM9SF2Q99805 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.48■□□□□ 0.39
TM9SF2Q99805 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TM9SF2Q99805 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.48■□□□□ 0.39
TM9SF2Q99805 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM9SF2Q99805 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.48■□□□□ 0.39
TM9SF2Q99805 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM9SF2Q99805 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TM9SF2Q99805 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM9SF2Q99805 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM9SF2Q99805 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM9SF2Q99805 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.48■□□□□ 0.39
TM9SF2Q99805 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TM9SF2Q99805 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.47■□□□□ 0.39
TM9SF2Q99805 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.47■□□□□ 0.39
TM9SF2Q99805 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM9SF2Q99805 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TM9SF2Q99805 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TM9SF2Q99805 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.47■□□□□ 0.39
TM9SF2Q99805 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.47■□□□□ 0.39
TM9SF2Q99805 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM9SF2Q99805 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TM9SF2Q99805 AC211429.1-201ENST00000415277 523 ntBASIC17.47■□□□□ 0.39
TM9SF2Q99805 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.47■□□□□ 0.39
TM9SF2Q99805 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.47■□□□□ 0.39
TM9SF2Q99805 AL031985.4-201ENST00000642138 673 ntBASIC17.47■□□□□ 0.39
TM9SF2Q99805 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
TM9SF2Q99805 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TM9SF2Q99805 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM9SF2Q99805 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM9SF2Q99805 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM9SF2Q99805 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.47■□□□□ 0.39
TM9SF2Q99805 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM9SF2Q99805 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.47■□□□□ 0.39
TM9SF2Q99805 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.47■□□□□ 0.39
TM9SF2Q99805 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.47■□□□□ 0.39
TM9SF2Q99805 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF2Q99805 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TM9SF2Q99805 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF2Q99805 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.46■□□□□ 0.39
TM9SF2Q99805 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF2Q99805 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
TM9SF2Q99805 AP001271.2-201ENST00000624018 1556 ntBASIC17.46■□□□□ 0.39
TM9SF2Q99805 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF2Q99805 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF2Q99805 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TM9SF2Q99805 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF2Q99805 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF2Q99805 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
TM9SF2Q99805 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF2Q99805 AL445675.2-201ENST00000620291 557 ntBASIC17.46■□□□□ 0.39
TM9SF2Q99805 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF2Q99805 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TM9SF2Q99805 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF2Q99805 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.46■□□□□ 0.39
TM9SF2Q99805 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF2Q99805 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF2Q99805 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF2Q99805 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.39
TM9SF2Q99805 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF2Q99805 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TM9SF2Q99805 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.46■□□□□ 0.39
TM9SF2Q99805 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF2Q99805 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF2Q99805 AC018470.1-201ENST00000624790 3129 ntBASIC17.45■□□□□ 0.38
TM9SF2Q99805 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF2Q99805 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.45■□□□□ 0.38
TM9SF2Q99805 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TM9SF2Q99805 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
TM9SF2Q99805 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF2Q99805 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF2Q99805 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.45■□□□□ 0.38
TM9SF2Q99805 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF2Q99805 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.45■□□□□ 0.38
TM9SF2Q99805 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF2Q99805 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.45■□□□□ 0.38
TM9SF2Q99805 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF2Q99805 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TM9SF2Q99805 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TM9SF2Q99805 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.45■□□□□ 0.38
TM9SF2Q99805 AC009113.1-201ENST00000570267 2443 ntBASIC17.45■□□□□ 0.38
TM9SF2Q99805 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF2Q99805 UNC93B2-201ENST00000285383 730 ntBASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms