Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GAFA1Q96PS6 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC15.68■□□□□ 0.1
GAFA1Q96PS6 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GAFA1Q96PS6 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GAFA1Q96PS6 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.68■□□□□ 0.1
GAFA1Q96PS6 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GAFA1Q96PS6 LINC01568-207ENST00000641790 1380 ntBASIC15.68■□□□□ 0.1
GAFA1Q96PS6 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
GAFA1Q96PS6 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.68■□□□□ 0.1
GAFA1Q96PS6 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GAFA1Q96PS6 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.68■□□□□ 0.1
GAFA1Q96PS6 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.68■□□□□ 0.1
GAFA1Q96PS6 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.68■□□□□ 0.1
GAFA1Q96PS6 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.68■□□□□ 0.1
GAFA1Q96PS6 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.68■□□□□ 0.1
GAFA1Q96PS6 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GAFA1Q96PS6 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GAFA1Q96PS6 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GAFA1Q96PS6 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC15.68■□□□□ 0.1
GAFA1Q96PS6 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.68■□□□□ 0.1
GAFA1Q96PS6 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GAFA1Q96PS6 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
GAFA1Q96PS6 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
GAFA1Q96PS6 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GAFA1Q96PS6 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC15.67■□□□□ 0.1
GAFA1Q96PS6 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GAFA1Q96PS6 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC15.67■□□□□ 0.1
GAFA1Q96PS6 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
GAFA1Q96PS6 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
GAFA1Q96PS6 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
GAFA1Q96PS6 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GAFA1Q96PS6 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GAFA1Q96PS6 MCCD1P1-208ENST00000445732 328 ntBASIC15.67■□□□□ 0.1
GAFA1Q96PS6 AC128688.1-201ENST00000487626 519 ntBASIC15.67■□□□□ 0.1
GAFA1Q96PS6 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GAFA1Q96PS6 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
GAFA1Q96PS6 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GAFA1Q96PS6 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC15.67■□□□□ 0.1
GAFA1Q96PS6 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GAFA1Q96PS6 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GAFA1Q96PS6 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
GAFA1Q96PS6 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.67■□□□□ 0.1
GAFA1Q96PS6 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.67■□□□□ 0.1
GAFA1Q96PS6 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GAFA1Q96PS6 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
GAFA1Q96PS6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GAFA1Q96PS6 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GAFA1Q96PS6 CROCCP3-202ENST00000420820 1947 ntBASIC15.66■□□□□ 0.1
GAFA1Q96PS6 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GAFA1Q96PS6 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.66■□□□□ 0.1
GAFA1Q96PS6 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GAFA1Q96PS6 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GAFA1Q96PS6 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GAFA1Q96PS6 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GAFA1Q96PS6 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
GAFA1Q96PS6 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GAFA1Q96PS6 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GAFA1Q96PS6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.66■□□□□ 0.1
GAFA1Q96PS6 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
GAFA1Q96PS6 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.66■□□□□ 0.1
GAFA1Q96PS6 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.66■□□□□ 0.1
GAFA1Q96PS6 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GAFA1Q96PS6 ECEL1P2-202ENST00000465689 757 ntBASIC15.66■□□□□ 0.1
GAFA1Q96PS6 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
GAFA1Q96PS6 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
GAFA1Q96PS6 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
GAFA1Q96PS6 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.66■□□□□ 0.1
GAFA1Q96PS6 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.66■□□□□ 0.1
GAFA1Q96PS6 AC145285.6-201ENST00000604632 637 ntBASIC15.66■□□□□ 0.1
GAFA1Q96PS6 AC010653.2-201ENST00000623505 997 ntBASIC15.66■□□□□ 0.1
GAFA1Q96PS6 AC133561.5-201ENST00000635547 218 ntBASIC15.66■□□□□ 0.1
GAFA1Q96PS6 MTMR9LP-203ENST00000426597 1545 ntBASIC15.66■□□□□ 0.1
GAFA1Q96PS6 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
GAFA1Q96PS6 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.66■□□□□ 0.1
GAFA1Q96PS6 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GAFA1Q96PS6 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
GAFA1Q96PS6 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.66■□□□□ 0.1
GAFA1Q96PS6 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
GAFA1Q96PS6 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GAFA1Q96PS6 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GAFA1Q96PS6 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.66■□□□□ 0.1
GAFA1Q96PS6 AC093525.10-201ENST00000625130 1569 ntBASIC15.66■□□□□ 0.1
GAFA1Q96PS6 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.66■□□□□ 0.1
GAFA1Q96PS6 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.66■□□□□ 0.1
GAFA1Q96PS6 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
GAFA1Q96PS6 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC15.65■□□□□ 0.1
GAFA1Q96PS6 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.65■□□□□ 0.1
GAFA1Q96PS6 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GAFA1Q96PS6 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GAFA1Q96PS6 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GAFA1Q96PS6 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
GAFA1Q96PS6 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC15.65■□□□□ 0.1
GAFA1Q96PS6 AL109659.2-201ENST00000606809 1674 ntBASIC15.65■□□□□ 0.1
GAFA1Q96PS6 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
GAFA1Q96PS6 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.65■□□□□ 0.1
GAFA1Q96PS6 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GAFA1Q96PS6 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.65■□□□□ 0.1
GAFA1Q96PS6 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GAFA1Q96PS6 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC15.65■□□□□ 0.1
GAFA1Q96PS6 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms