Protein–RNA interactions for Protein: Q92629

SGCD, Delta-sarcoglycan, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCDQ92629 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SGCDQ92629 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SGCDQ92629 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SGCDQ92629 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.24■□□□□ 0.35
SGCDQ92629 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
SGCDQ92629 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SGCDQ92629 KRT18P68-201ENST00000392293 1000 ntBASIC17.24■□□□□ 0.35
SGCDQ92629 AC034268.1-201ENST00000441047 882 ntBASIC17.24■□□□□ 0.35
SGCDQ92629 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SGCDQ92629 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SGCDQ92629 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SGCDQ92629 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SGCDQ92629 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SGCDQ92629 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SGCDQ92629 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
SGCDQ92629 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
SGCDQ92629 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.24■□□□□ 0.35
SGCDQ92629 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SGCDQ92629 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SGCDQ92629 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SGCDQ92629 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SGCDQ92629 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SGCDQ92629 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SGCDQ92629 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SGCDQ92629 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SGCDQ92629 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SGCDQ92629 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.23■□□□□ 0.35
SGCDQ92629 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.23■□□□□ 0.35
SGCDQ92629 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SGCDQ92629 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SGCDQ92629 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SGCDQ92629 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SGCDQ92629 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SGCDQ92629 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SGCDQ92629 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SGCDQ92629 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SGCDQ92629 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
SGCDQ92629 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
SGCDQ92629 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.23■□□□□ 0.35
SGCDQ92629 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.23■□□□□ 0.35
SGCDQ92629 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.23■□□□□ 0.35
SGCDQ92629 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SGCDQ92629 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.23■□□□□ 0.35
SGCDQ92629 AC010536.3-201ENST00000620306 533 ntBASIC17.23■□□□□ 0.35
SGCDQ92629 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SGCDQ92629 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.23■□□□□ 0.35
SGCDQ92629 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.23■□□□□ 0.35
SGCDQ92629 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SGCDQ92629 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SGCDQ92629 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SGCDQ92629 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SGCDQ92629 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.23■□□□□ 0.35
SGCDQ92629 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SGCDQ92629 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SGCDQ92629 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SGCDQ92629 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SGCDQ92629 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SGCDQ92629 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.22■□□□□ 0.35
SGCDQ92629 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.22■□□□□ 0.35
SGCDQ92629 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SGCDQ92629 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.22■□□□□ 0.35
SGCDQ92629 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SGCDQ92629 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SGCDQ92629 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SGCDQ92629 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SGCDQ92629 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SGCDQ92629 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SGCDQ92629 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SGCDQ92629 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.22■□□□□ 0.35
SGCDQ92629 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.22■□□□□ 0.35
SGCDQ92629 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.22■□□□□ 0.35
SGCDQ92629 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.22■□□□□ 0.35
SGCDQ92629 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SGCDQ92629 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SGCDQ92629 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.22■□□□□ 0.35
SGCDQ92629 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.22■□□□□ 0.35
SGCDQ92629 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SGCDQ92629 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SGCDQ92629 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.22■□□□□ 0.35
SGCDQ92629 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SGCDQ92629 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
SGCDQ92629 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.22■□□□□ 0.35
SGCDQ92629 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SGCDQ92629 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SGCDQ92629 GNAS-203ENST00000306120 1878 ntBASIC17.22■□□□□ 0.35
SGCDQ92629 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SGCDQ92629 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SGCDQ92629 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SGCDQ92629 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SGCDQ92629 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SGCDQ92629 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
SGCDQ92629 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SGCDQ92629 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.21■□□□□ 0.35
SGCDQ92629 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.21■□□□□ 0.35
SGCDQ92629 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SGCDQ92629 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SGCDQ92629 AL356309.3-201ENST00000624132 1934 ntBASIC17.21■□□□□ 0.35
SGCDQ92629 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SGCDQ92629 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SGCDQ92629 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms