Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDH20Q8N6Y1 ATP5G1P1-201ENST00000448724 379 ntBASIC19.25■□□□□ 0.67
PCDH20Q8N6Y1 AP003041.3-201ENST00000527151 707 ntBASIC19.25■□□□□ 0.67
PCDH20Q8N6Y1 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH20Q8N6Y1 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH20Q8N6Y1 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDH20Q8N6Y1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PCDH20Q8N6Y1 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDH20Q8N6Y1 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH20Q8N6Y1 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH20Q8N6Y1 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH20Q8N6Y1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH20Q8N6Y1 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PCDH20Q8N6Y1 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH20Q8N6Y1 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH20Q8N6Y1 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDH20Q8N6Y1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH20Q8N6Y1 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PCDH20Q8N6Y1 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH20Q8N6Y1 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH20Q8N6Y1 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH20Q8N6Y1 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH20Q8N6Y1 TMPOP1-202ENST00000424642 1267 ntBASIC19.24■□□□□ 0.67
PCDH20Q8N6Y1 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH20Q8N6Y1 AC010203.1-204ENST00000548782 407 ntBASIC19.24■□□□□ 0.67
PCDH20Q8N6Y1 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDH20Q8N6Y1 AL512604.3-201ENST00000569583 964 ntBASIC19.24■□□□□ 0.67
PCDH20Q8N6Y1 RN7SL850P-201ENST00000579959 291 ntBASIC19.24■□□□□ 0.67
PCDH20Q8N6Y1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDH20Q8N6Y1 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH20Q8N6Y1 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH20Q8N6Y1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH20Q8N6Y1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH20Q8N6Y1 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH20Q8N6Y1 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH20Q8N6Y1 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH20Q8N6Y1 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH20Q8N6Y1 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH20Q8N6Y1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH20Q8N6Y1 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH20Q8N6Y1 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH20Q8N6Y1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH20Q8N6Y1 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDH20Q8N6Y1 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH20Q8N6Y1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PCDH20Q8N6Y1 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDH20Q8N6Y1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDH20Q8N6Y1 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDH20Q8N6Y1 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PCDH20Q8N6Y1 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH20Q8N6Y1 AC141586.3-201ENST00000562166 1838 ntBASIC19.23■□□□□ 0.67
PCDH20Q8N6Y1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
PCDH20Q8N6Y1 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH20Q8N6Y1 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDH20Q8N6Y1 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH20Q8N6Y1 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH20Q8N6Y1 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDH20Q8N6Y1 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDH20Q8N6Y1 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH20Q8N6Y1 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDH20Q8N6Y1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH20Q8N6Y1 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.23■□□□□ 0.67
PCDH20Q8N6Y1 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
PCDH20Q8N6Y1 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PCDH20Q8N6Y1 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PCDH20Q8N6Y1 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDH20Q8N6Y1 AIRN-201ENST00000601203 4374 ntBASIC19.23■□□□□ 0.67
PCDH20Q8N6Y1 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH20Q8N6Y1 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDH20Q8N6Y1 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH20Q8N6Y1 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH20Q8N6Y1 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH20Q8N6Y1 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH20Q8N6Y1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDH20Q8N6Y1 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH20Q8N6Y1 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PCDH20Q8N6Y1 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDH20Q8N6Y1 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
PCDH20Q8N6Y1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
PCDH20Q8N6Y1 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH20Q8N6Y1 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH20Q8N6Y1 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.22■□□□□ 0.67
PCDH20Q8N6Y1 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH20Q8N6Y1 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDH20Q8N6Y1 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH20Q8N6Y1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH20Q8N6Y1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PCDH20Q8N6Y1 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH20Q8N6Y1 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH20Q8N6Y1 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH20Q8N6Y1 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.22■□□□□ 0.67
PCDH20Q8N6Y1 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
PCDH20Q8N6Y1 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDH20Q8N6Y1 KRT18P57-201ENST00000443599 1254 ntBASIC19.22■□□□□ 0.67
PCDH20Q8N6Y1 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH20Q8N6Y1 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDH20Q8N6Y1 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDH20Q8N6Y1 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDH20Q8N6Y1 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH20Q8N6Y1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms