Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 UNC93B5-201ENST00000530315 699 ntBASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 KLF2-202ENST00000592003 564 ntTSL 3 BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 AL356309.3-201ENST00000624132 1934 ntBASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
MRPL55Q7Z7F7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
MRPL55Q7Z7F7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.47
MRPL55Q7Z7F7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
MRPL55Q7Z7F7 NBPF21P-201ENST00000425093 1451 ntBASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 KRT17P3-201ENST00000420566 1262 ntBASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL55Q7Z7F7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 RNA5SP413-201ENST00000516373 109 ntBASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 AP003097.1-201ENST00000530657 1135 ntBASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms