Protein–RNA interactions for Protein: Q08209

PPP3CA, Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CAQ08209 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
PPP3CAQ08209 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PPP3CAQ08209 CYP2D8P-201ENST00000433633 1490 ntBASIC20.36■□□□□ 0.85
PPP3CAQ08209 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
PPP3CAQ08209 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PPP3CAQ08209 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PPP3CAQ08209 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.35■□□□□ 0.85
PPP3CAQ08209 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.35■□□□□ 0.85
PPP3CAQ08209 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PPP3CAQ08209 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PPP3CAQ08209 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.35■□□□□ 0.85
PPP3CAQ08209 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PPP3CAQ08209 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
PPP3CAQ08209 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.35■□□□□ 0.85
PPP3CAQ08209 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
PPP3CAQ08209 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.35■□□□□ 0.85
PPP3CAQ08209 MIR4674-201ENST00000582457 87 ntBASIC20.35■□□□□ 0.85
PPP3CAQ08209 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.35■□□□□ 0.85
PPP3CAQ08209 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.35■□□□□ 0.85
PPP3CAQ08209 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.35■□□□□ 0.85
PPP3CAQ08209 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PPP3CAQ08209 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.35■□□□□ 0.85
PPP3CAQ08209 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PPP3CAQ08209 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PPP3CAQ08209 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.35■□□□□ 0.85
PPP3CAQ08209 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PPP3CAQ08209 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PPP3CAQ08209 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PPP3CAQ08209 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PPP3CAQ08209 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
PPP3CAQ08209 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.34■□□□□ 0.85
PPP3CAQ08209 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PPP3CAQ08209 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PPP3CAQ08209 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PPP3CAQ08209 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PPP3CAQ08209 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
PPP3CAQ08209 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PPP3CAQ08209 AL023284.2-201ENST00000405850 579 ntBASIC20.34■□□□□ 0.85
PPP3CAQ08209 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.34■□□□□ 0.85
PPP3CAQ08209 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PPP3CAQ08209 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.34■□□□□ 0.85
PPP3CAQ08209 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.34■□□□□ 0.85
PPP3CAQ08209 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.34■□□□□ 0.85
PPP3CAQ08209 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PPP3CAQ08209 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PPP3CAQ08209 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PPP3CAQ08209 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
PPP3CAQ08209 AC008556.1-201ENST00000610908 2040 ntBASIC20.34■□□□□ 0.85
PPP3CAQ08209 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PPP3CAQ08209 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PPP3CAQ08209 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PPP3CAQ08209 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PPP3CAQ08209 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.34■□□□□ 0.85
PPP3CAQ08209 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
PPP3CAQ08209 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PPP3CAQ08209 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PPP3CAQ08209 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PPP3CAQ08209 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PPP3CAQ08209 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.33■□□□□ 0.85
PPP3CAQ08209 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
PPP3CAQ08209 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PPP3CAQ08209 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.33■□□□□ 0.85
PPP3CAQ08209 AL357033.4-201ENST00000617703 1807 ntBASIC20.33■□□□□ 0.85
PPP3CAQ08209 INGX-201ENST00000359239 846 ntBASIC20.33■□□□□ 0.85
PPP3CAQ08209 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.33■□□□□ 0.85
PPP3CAQ08209 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.85
PPP3CAQ08209 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.33■□□□□ 0.85
PPP3CAQ08209 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PPP3CAQ08209 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.33■□□□□ 0.85
PPP3CAQ08209 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.33■□□□□ 0.85
PPP3CAQ08209 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
PPP3CAQ08209 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PPP3CAQ08209 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PPP3CAQ08209 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.33■□□□□ 0.84
PPP3CAQ08209 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PPP3CAQ08209 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PPP3CAQ08209 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
PPP3CAQ08209 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPP3CAQ08209 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPP3CAQ08209 AL499627.1-201ENST00000569373 2188 ntBASIC20.32■□□□□ 0.84
PPP3CAQ08209 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.32■□□□□ 0.84
PPP3CAQ08209 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PPP3CAQ08209 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPP3CAQ08209 WIZP1-201ENST00000531444 2299 ntBASIC20.32■□□□□ 0.84
PPP3CAQ08209 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPP3CAQ08209 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PPP3CAQ08209 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.32■□□□□ 0.84
PPP3CAQ08209 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PPP3CAQ08209 SLC25A1P2-201ENST00000430693 912 ntBASIC20.32■□□□□ 0.84
PPP3CAQ08209 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.32■□□□□ 0.84
PPP3CAQ08209 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PPP3CAQ08209 AC010947.1-201ENST00000623454 693 ntBASIC20.32■□□□□ 0.84
PPP3CAQ08209 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPP3CAQ08209 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.32■□□□□ 0.84
PPP3CAQ08209 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.32■□□□□ 0.84
PPP3CAQ08209 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PPP3CAQ08209 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PPP3CAQ08209 AL109659.2-201ENST00000606809 1674 ntBASIC20.32■□□□□ 0.84
PPP3CAQ08209 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPP3CAQ08209 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms