Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC13.34□□□□□ -0.27
RPL39P62891 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC13.34□□□□□ -0.27
RPL39P62891 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
RPL39P62891 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
RPL39P62891 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RPL39P62891 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC13.34□□□□□ -0.27
RPL39P62891 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RPL39P62891 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RPL39P62891 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RPL39P62891 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
RPL39P62891 KRT8P8-201ENST00000434750 1448 ntBASIC13.34□□□□□ -0.27
RPL39P62891 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
RPL39P62891 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RPL39P62891 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RPL39P62891 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
RPL39P62891 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
RPL39P62891 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RPL39P62891 AC011767.1-201ENST00000617410 1153 ntBASIC13.34□□□□□ -0.27
RPL39P62891 BID-214ENST00000617586 542 ntTSL 5 BASIC13.34□□□□□ -0.27
RPL39P62891 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
RPL39P62891 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RPL39P62891 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RPL39P62891 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC13.34□□□□□ -0.27
RPL39P62891 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RPL39P62891 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
RPL39P62891 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
RPL39P62891 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC13.34□□□□□ -0.27
RPL39P62891 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RPL39P62891 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RPL39P62891 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
RPL39P62891 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
RPL39P62891 HR-201ENST00000312841 5351 ntTSL 5 BASIC13.34□□□□□ -0.27
RPL39P62891 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC13.34□□□□□ -0.27
RPL39P62891 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RPL39P62891 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RPL39P62891 AC008764.6-201ENST00000595909 2069 ntBASIC13.33□□□□□ -0.27
RPL39P62891 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
RPL39P62891 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
RPL39P62891 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC13.33□□□□□ -0.28
RPL39P62891 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC13.33□□□□□ -0.28
RPL39P62891 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RPL39P62891 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RPL39P62891 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RPL39P62891 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
RPL39P62891 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RPL39P62891 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
RPL39P62891 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC13.33□□□□□ -0.28
RPL39P62891 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC13.33□□□□□ -0.28
RPL39P62891 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC13.33□□□□□ -0.28
RPL39P62891 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC13.33□□□□□ -0.28
RPL39P62891 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RPL39P62891 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RPL39P62891 WWOX-218ENST00000627394 894 ntTSL 5 BASIC13.33□□□□□ -0.28
RPL39P62891 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC13.33□□□□□ -0.28
RPL39P62891 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RPL39P62891 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RPL39P62891 AC124283.5-201ENST00000624661 1809 ntBASIC13.33□□□□□ -0.28
RPL39P62891 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RPL39P62891 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RPL39P62891 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RPL39P62891 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RPL39P62891 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RPL39P62891 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RPL39P62891 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC13.33□□□□□ -0.28
RPL39P62891 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC13.33□□□□□ -0.28
RPL39P62891 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RPL39P62891 GATB-213ENST00000515812 1893 ntTSL 5 BASIC13.33□□□□□ -0.28
RPL39P62891 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
RPL39P62891 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RPL39P62891 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
RPL39P62891 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RPL39P62891 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RPL39P62891 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RPL39P62891 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
RPL39P62891 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC13.32□□□□□ -0.28
RPL39P62891 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL39P62891 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL39P62891 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL39P62891 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
RPL39P62891 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
RPL39P62891 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
RPL39P62891 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL39P62891 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL39P62891 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL39P62891 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL39P62891 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
RPL39P62891 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL39P62891 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL39P62891 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
RPL39P62891 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL39P62891 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RPL39P62891 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC13.32□□□□□ -0.28
RPL39P62891 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
RPL39P62891 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL39P62891 HSCB-202ENST00000398941 955 ntTSL 2 BASIC13.32□□□□□ -0.28
RPL39P62891 AL390719.1-204ENST00000412397 1219 ntBASIC13.32□□□□□ -0.28
RPL39P62891 HES2-206ENST00000489730 730 ntTSL 2 BASIC13.32□□□□□ -0.28
RPL39P62891 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC13.32□□□□□ -0.28
RPL39P62891 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC13.32□□□□□ -0.28
RPL39P62891 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms