Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PCP4P48539 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PCP4P48539 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PCP4P48539 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PCP4P48539 WIZP1-201ENST00000531444 2299 ntBASIC13.04□□□□□ -0.32
PCP4P48539 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PCP4P48539 AC011484.1-201ENST00000377652 1995 ntBASIC13.04□□□□□ -0.32
PCP4P48539 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PCP4P48539 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
PCP4P48539 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC13.04□□□□□ -0.32
PCP4P48539 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
PCP4P48539 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PCP4P48539 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.04□□□□□ -0.32
PCP4P48539 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
PCP4P48539 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
PCP4P48539 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
PCP4P48539 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
PCP4P48539 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
PCP4P48539 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PCP4P48539 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PCP4P48539 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PCP4P48539 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PCP4P48539 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PCP4P48539 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PCP4P48539 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PCP4P48539 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PCP4P48539 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
PCP4P48539 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.04□□□□□ -0.32
PCP4P48539 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
PCP4P48539 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PCP4P48539 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
PCP4P48539 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
PCP4P48539 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PCP4P48539 GNAS-203ENST00000306120 1878 ntBASIC13.04□□□□□ -0.32
PCP4P48539 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
PCP4P48539 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PCP4P48539 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
PCP4P48539 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PCP4P48539 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PCP4P48539 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
PCP4P48539 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
PCP4P48539 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PCP4P48539 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.03□□□□□ -0.32
PCP4P48539 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PCP4P48539 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PCP4P48539 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
PCP4P48539 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PCP4P48539 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PCP4P48539 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
PCP4P48539 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PCP4P48539 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PCP4P48539 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PCP4P48539 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.03□□□□□ -0.32
PCP4P48539 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PCP4P48539 AC104640.1-201ENST00000562617 2109 ntBASIC13.03□□□□□ -0.32
PCP4P48539 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PCP4P48539 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC13.03□□□□□ -0.32
PCP4P48539 AC139749.1-202ENST00000617529 3139 ntBASIC13.03□□□□□ -0.32
PCP4P48539 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
PCP4P48539 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
PCP4P48539 AL359258.3-201ENST00000622910 2331 ntBASIC13.03□□□□□ -0.32
PCP4P48539 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
PCP4P48539 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PCP4P48539 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
PCP4P48539 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
PCP4P48539 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PCP4P48539 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PCP4P48539 BID-203ENST00000399765 1879 ntTSL 2 BASIC13.03□□□□□ -0.32
PCP4P48539 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
PCP4P48539 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PCP4P48539 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PCP4P48539 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC13.03□□□□□ -0.32
PCP4P48539 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.03□□□□□ -0.32
PCP4P48539 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
PCP4P48539 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PCP4P48539 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
PCP4P48539 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PCP4P48539 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PCP4P48539 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.03□□□□□ -0.32
PCP4P48539 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
PCP4P48539 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC13.02□□□□□ -0.32
PCP4P48539 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
PCP4P48539 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
PCP4P48539 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
PCP4P48539 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
PCP4P48539 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
PCP4P48539 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
PCP4P48539 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.02□□□□□ -0.32
PCP4P48539 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.02□□□□□ -0.32
PCP4P48539 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.32
PCP4P48539 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
PCP4P48539 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PCP4P48539 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PCP4P48539 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PCP4P48539 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PCP4P48539 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PCP4P48539 MIR6089-201ENST00000616698 64 ntBASIC13.02□□□□□ -0.33
PCP4P48539 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PCP4P48539 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PCP4P48539 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms