Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.322e-6■■■□□ 18.7
MATR3P43243 NRIP1-205ENST00000637630 573 ntTSL 313.43□□□□□ -0.261e-8■■■□□ 18.7
MATR3P43243 NRIP1-206ENST00000637963 498 ntTSL 411.27□□□□□ -0.611e-8■■■□□ 18.7
MATR3P43243 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.86■□□□□ 0.613e-7■■■□□ 18.7
MATR3P43243 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.173e-7■■■□□ 18.7
MATR3P43243 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.073e-7■■■□□ 18.7
MATR3P43243 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC15.12■□□□□ 0.013e-7■■■□□ 18.7
MATR3P43243 PCMTD1-203ENST00000519559 1204 ntTSL 27.21□□□□□ -1.263e-7■■■□□ 18.7
MATR3P43243 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.31e-6■■■□□ 18.6
MATR3P43243 WWC2-209ENST00000513834 4887 ntTSL 5 BASIC14.48□□□□□ -0.091e-6■■■□□ 18.6
MATR3P43243 WWC2-204ENST00000448232 6356 ntTSL 5 BASIC12.7□□□□□ -0.381e-6■■■□□ 18.6
MATR3P43243 LRMDA-201ENST00000372499 899 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.821e-6■■■□□ 18.6
MATR3P43243 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC27.36■■□□□ 1.972e-6■■■□□ 18.6
MATR3P43243 ZCCHC2-202ENST00000585873 5652 ntTSL 1 (best)22.76■■□□□ 1.232e-6■■■□□ 18.6
MATR3P43243 USP40-207ENST00000450940 670 ntTSL 321.14■□□□□ 0.972e-6■■■□□ 18.6
MATR3P43243 USP40-217ENST00000496298 665 ntTSL 221.14■□□□□ 0.972e-6■■■□□ 18.6
MATR3P43243 ZCCHC2-210ENST00000591632 608 ntTSL 320.33■□□□□ 0.852e-6■■■□□ 18.6
MATR3P43243 USP40-212ENST00000473191 590 ntTSL 318.21■□□□□ 0.512e-6■■■□□ 18.6
MATR3P43243 USP40-214ENST00000483519 2722 ntTSL 1 (best)14.77□□□□□ -0.052e-6■■■□□ 18.6
MATR3P43243 USP40-210ENST00000454354 348 ntTSL 213.13□□□□□ -0.312e-6■■■□□ 18.6
MATR3P43243 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.862e-6■■■□□ 18.6
MATR3P43243 ZCCHC2-203ENST00000585949 2429 ntTSL 29.03□□□□□ -0.962e-6■■■□□ 18.6
MATR3P43243 ZCCHC2-209ENST00000591435 455 ntTSL 32.49□□□□□ -2.012e-6■■■□□ 18.6
MATR3P43243 WASL-201ENST00000223023 4435 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.133e-6■■■□□ 18.6
MATR3P43243 NET1-201ENST00000355029 3402 ntTSL 1 (best) BASIC12.56□□□□□ -0.42e-6■■■□□ 18.6
MATR3P43243 CDC42BPA-203ENST00000366766 10610 ntTSL 5 BASIC13.7□□□□□ -0.225e-7■■■□□ 18.6
MATR3P43243 CDC42BPA-202ENST00000366764 10445 ntTSL 1 (best) BASIC13.27□□□□□ -0.285e-7■■■□□ 18.6
MATR3P43243 CDC42BPA-205ENST00000366769 10855 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.345e-7■■■□□ 18.6
MATR3P43243 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC7.14□□□□□ -1.275e-7■■■□□ 18.6
MATR3P43243 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.98□□□□□ -1.455e-7■■■□□ 18.6
MATR3P43243 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.065e-7■■■□□ 18.6
MATR3P43243 ST7-219ENST00000462544 550 ntTSL 47.72□□□□□ -1.175e-10■■■□□ 18.6
MATR3P43243 GDA-209ENST00000545168 5362 ntTSL 2 BASIC7.52□□□□□ -1.213e-7■■■□□ 18.6
MATR3P43243 ST7-214ENST00000434836 579 ntTSL 47.29□□□□□ -1.245e-10■■■□□ 18.6
MATR3P43243 ST7-223ENST00000467538 565 ntTSL 57.03□□□□□ -1.285e-10■■■□□ 18.6
MATR3P43243 ST7-224ENST00000477742 780 ntTSL 46.37□□□□□ -1.395e-10■■■□□ 18.6
MATR3P43243 ST7-218ENST00000449366 542 ntTSL 55.6□□□□□ -1.515e-10■■■□□ 18.6
MATR3P43243 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.17□□□□□ -1.745e-10■■■□□ 18.6
MATR3P43243 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.222e-6■■■□□ 18.6
MATR3P43243 BTBD3-207ENST00000449299 849 ntTSL 223.82■■□□□ 1.47e-7■■■□□ 18.6
MATR3P43243 BTBD3-208ENST00000450368 485 ntTSL 223.41■■□□□ 1.347e-7■■■□□ 18.6
MATR3P43243 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.627e-7■■■□□ 18.6
MATR3P43243 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.027e-7■■■□□ 18.6
MATR3P43243 BTBD3-203ENST00000399006 4826 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.17e-7■■■□□ 18.6
MATR3P43243 BTBD3-215ENST00000618918 4486 ntAPPRIS ALT1 TSL 4 BASIC10.39□□□□□ -0.757e-7■■■□□ 18.6
MATR3P43243 BTBD3-205ENST00000422390 583 ntTSL 44.59□□□□□ -1.677e-7■■■□□ 18.6
MATR3P43243 XRCC5-202ENST00000392133 3761 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.782e-6■■■□□ 18.6
MATR3P43243 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.192e-6■■■□□ 18.6
MATR3P43243 XRCC5-206ENST00000460284 2962 ntTSL 1 (best)6.47□□□□□ -1.372e-6■■■□□ 18.6
MATR3P43243 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.32e-7■■■□□ 18.6
MATR3P43243 AMBP-204ENST00000603230 1057 ntTSL 1 (best)16.84■□□□□ 0.292e-7■■■□□ 18.6
MATR3P43243 AMBP-203ENST00000540645 1356 ntTSL 213.9□□□□□ -0.182e-7■■■□□ 18.6
MATR3P43243 AMBP-202ENST00000466610 579 ntTSL 311.02□□□□□ -0.652e-7■■■□□ 18.6
MATR3P43243 AC106744.1-201ENST00000504827 660 ntTSL 3 BASIC11.31□□□□□ -0.61e-6■■■□□ 18.6
MATR3P43243 PSMB2-201ENST00000373237 2701 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.412e-6■■■□□ 18.6
MATR3P43243 PSMB2-203ENST00000630477 1127 ntTSL 1 (best)10.63□□□□□ -0.712e-6■■■□□ 18.6
MATR3P43243 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC7.07□□□□□ -1.282e-6■■■□□ 18.6
MATR3P43243 FNDC3A-206ENST00000541916 6328 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.761e-6■■■□□ 18.6
MATR3P43243 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.811e-6■■■□□ 18.6
MATR3P43243 FNDC3A-203ENST00000484074 6082 ntTSL 1 (best)4.89□□□□□ -1.631e-6■■■□□ 18.6
MATR3P43243 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.92□□□□□ -1.781e-6■■■□□ 18.6
MATR3P43243 PHKB-214ENST00000567402 1617 ntTSL 1 (best)11.39□□□□□ -0.592e-6■■■□□ 18.6
MATR3P43243 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.536e-7■■■□□ 18.6
MATR3P43243 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.476e-7■■■□□ 18.6
MATR3P43243 SIK3-204ENST00000445177 6331 ntAPPRIS ALT2 TSL 515.29■□□□□ 0.046e-7■■■□□ 18.6
MATR3P43243 SIK3-203ENST00000415541 3816 ntTSL 1 (best)8.56□□□□□ -1.046e-7■■■□□ 18.6
MATR3P43243 PRKCZ-215ENST00000479263 1747 ntTSL 223.51■■□□□ 1.351e-13■■■□□ 18.6
MATR3P43243 PRKCZ-210ENST00000470596 788 ntTSL 223.03■■□□□ 1.281e-13■■■□□ 18.6
MATR3P43243 PRKCZ-218ENST00000482686 614 ntTSL 320.35■□□□□ 0.851e-13■■■□□ 18.6
MATR3P43243 PRKCZ-220ENST00000486681 966 ntTSL 320.35■□□□□ 0.851e-13■■■□□ 18.6
MATR3P43243 PRKCZ-205ENST00000461465 480 ntTSL 418.76■□□□□ 0.591e-13■■■□□ 18.6
MATR3P43243 PRKCZ-204ENST00000461106 1916 ntTSL 218.43■□□□□ 0.541e-13■■■□□ 18.6
MATR3P43243 PRKCZ-212ENST00000471018 716 ntTSL 318.28■□□□□ 0.521e-13■■■□□ 18.6
MATR3P43243 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.42■□□□□ 0.381e-13■■■□□ 18.6
MATR3P43243 PRKCZ-222ENST00000496325 563 ntTSL 417.31■□□□□ 0.361e-13■■■□□ 18.6
MATR3P43243 PRKCZ-214ENST00000478770 1542 ntTSL 216.09■□□□□ 0.171e-13■■■□□ 18.6
MATR3P43243 PRKCZ-225ENST00000503672 1213 ntTSL 1 (best)13.26□□□□□ -0.291e-13■■■□□ 18.6
MATR3P43243 PRKCZ-211ENST00000470986 706 ntTSL 212.65□□□□□ -0.381e-13■■■□□ 18.6
MATR3P43243 PRKCZ-209ENST00000470511 567 ntTSL 411.16□□□□□ -0.621e-13■■■□□ 18.6
MATR3P43243 PRKCZ-217ENST00000481140 713 ntTSL 48.13□□□□□ -1.111e-13■■■□□ 18.6
MATR3P43243 CHN2-216ENST00000446446 542 ntTSL 47.93□□□□□ -1.142e-6■■■□□ 18.6
MATR3P43243 PRKCZ-223ENST00000497183 763 ntTSL 37.87□□□□□ -1.151e-13■■■□□ 18.6
MATR3P43243 PRKCZ-203ENST00000419838 347 ntTSL 36.4□□□□□ -1.381e-13■■■□□ 18.6
MATR3P43243 FRRS1-201ENST00000287474 2678 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.92e-7■■■□□ 18.6
MATR3P43243 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC22.81■■□□□ 1.247e-7■■■□□ 18.5
MATR3P43243 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.75■■□□□ 1.077e-7■■■□□ 18.5
MATR3P43243 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.3■■□□□ 17e-7■■■□□ 18.5
MATR3P43243 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.12■□□□□ 0.977e-7■■■□□ 18.5
MATR3P43243 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21■□□□□ 0.957e-7■■■□□ 18.5
MATR3P43243 ST3GAL3-225ENST00000489897 998 ntTSL 520.97■□□□□ 0.957e-7■■■□□ 18.5
MATR3P43243 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.73■□□□□ 0.917e-7■■■□□ 18.5
MATR3P43243 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.67■□□□□ 0.97e-7■■■□□ 18.5
MATR3P43243 ST3GAL3-230ENST00000530154 1670 ntTSL 220.03■□□□□ 0.87e-7■■■□□ 18.5
MATR3P43243 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.69■□□□□ 0.267e-7■■■□□ 18.5
MATR3P43243 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.257e-7■■■□□ 18.5
MATR3P43243 ST3GAL3-202ENST00000330208 1479 ntTSL 5 BASIC14.12□□□□□ -0.157e-7■■■□□ 18.5
MATR3P43243 ST3GAL3-217ENST00000372369 1038 ntTSL 1 (best) BASIC12.09□□□□□ -0.477e-7■■■□□ 18.5
MATR3P43243 ST3GAL3-210ENST00000361746 1335 ntTSL 1 (best) BASIC11.59□□□□□ -0.557e-7■■■□□ 18.5
MATR3P43243 ST3GAL3-215ENST00000372367 644 ntTSL 1 (best) BASIC11.14□□□□□ -0.637e-7■■■□□ 18.5
MATR3P43243 ST3GAL3-229ENST00000528371 599 ntTSL 1 (best) BASIC11.14□□□□□ -0.637e-7■■■□□ 18.5
Retrieved 100 of 16,209 protein–RNA pairs in 128.1 ms