RNA–Protein interactions for RNA: ENST00000484074.5

FNDC3A-203, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 1 (best)

Gene FNDC3A, Length 6,082 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-203ENST00000484074 DCAF8L2P0C7V8 631 aa7.09□□□□□ -1.28
FNDC3A-203ENST00000484074 FAM9AQ8IZU1 332 aaPredicted RBP6.64□□□□□ -1.35
FNDC3A-203ENST00000484074 SLC24A1O60721 1099 aa6.42□□□□□ -1.38
FNDC3A-203ENST00000484074 APLP2Q06481 763 aa6.4□□□□□ -1.39
FNDC3A-203ENST00000484074 EHMT2Q96KQ7 1210 aa6.36□□□□□ -1.39
FNDC3A-203ENST00000484074 PELP1Q8IZL8 1130 aaKnown RBP6.33□□□□□ -1.4
FNDC3A-203ENST00000484074 SUPT5HO00267 1087 aaKnown RBP6.32□□□□□ -1.4
FNDC3A-203ENST00000484074 MYT1LQ9UL68 1186 aa6.26□□□□□ -1.41
FNDC3A-203ENST00000484074 ATP1B4Q9UN42 357 aaPredicted RBP6.25□□□□□ -1.41
FNDC3A-203ENST00000484074 MYT1Q01538 1121 aa6.2□□□□□ -1.42
FNDC3A-203ENST00000484074 RANGAP1P46060 587 aaPredicted RBP6.17□□□□□ -1.42
FNDC3A-203ENST00000484074 SHROOM4Q9ULL8 1493 aa6.14□□□□□ -1.43
FNDC3A-203ENST00000484074 CHIC1Q5VXU3 224 aa6.11□□□□□ -1.43
FNDC3A-203ENST00000484074 TTBK1Q5TCY1 1321 aaPredicted RBP6.11□□□□□ -1.43
FNDC3A-203ENST00000484074 ERICH6Q7L0X2 663 aa6.1□□□□□ -1.43
FNDC3A-203ENST00000484074 CCER1Q8TC90 406 aaPredicted RBP6.08□□□□□ -1.44
FNDC3A-203ENST00000484074 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.07□□□□□ -1.44
FNDC3A-203ENST00000484074 HNRNPUL2Q1KMD3 747 aaKnown RBP6.07□□□□□ -1.44
FNDC3A-203ENST00000484074 NISCHQ9Y2I1 1504 aa6.02□□□□□ -1.45
FNDC3A-203ENST00000484074 SLC4A1APQ9BWU0 796 aaKnown RBP6.02□□□□□ -1.45
FNDC3A-203ENST00000484074 UBTFP17480 764 aaKnown RBP5.95□□□□□ -1.46
FNDC3A-203ENST00000484074 POLR3GLQ9BT43 218 aa5.94□□□□□ -1.46
FNDC3A-203ENST00000484074 DAXXQ9UER7 740 aaPredicted RBP5.92□□□□□ -1.46
FNDC3A-203ENST00000484074 BCANQ96GW7 911 aa5.91□□□□□ -1.46
FNDC3A-203ENST00000484074 NEFLP07196 543 aa5.91□□□□□ -1.46
FNDC3A-203ENST00000484074 PCGF6Q9BYE7 350 aa5.89□□□□□ -1.47
FNDC3A-203ENST00000484074 TRIM41Q8WV44 630 aa5.87□□□□□ -1.47
FNDC3A-203ENST00000484074 ESF1Q9H501 851 aaKnown RBP5.85□□□□□ -1.47
FNDC3A-203ENST00000484074 PLPPR3Q6T4P5 718 aa5.83□□□□□ -1.48
FNDC3A-203ENST00000484074 CNGB1Q14028 1251 aaPredicted RBP5.82□□□□□ -1.48
FNDC3A-203ENST00000484074 CENPBP07199 599 aaPredicted RBP5.81□□□□□ -1.48
FNDC3A-203ENST00000484074 FBLN2P98095 1184 aa5.81□□□□□ -1.48
FNDC3A-203ENST00000484074 ITGAEP38570 1179 aa5.8□□□□□ -1.48
FNDC3A-203ENST00000484074 ZBTB47Q9UFB7 747 aaPredicted RBP5.8□□□□□ -1.48
FNDC3A-203ENST00000484074 CLSPNQ9HAW4 1339 aa5.78□□□□□ -1.48
FNDC3A-203ENST00000484074 NEFMP07197 916 aa5.75□□□□□ -1.49
FNDC3A-203ENST00000484074 ZNF316A6NFI3 1004 aaPredicted RBP5.73□□□□□ -1.49
FNDC3A-203ENST00000484074 A0A0G2JS52 829 aa5.73□□□□□ -1.49
FNDC3A-203ENST00000484074 STAG3Q9UJ98 1225 aa5.73□□□□□ -1.49
FNDC3A-203ENST00000484074 SCAF1Q9H7N4 1312 aaKnown RBP5.72□□□□□ -1.49
FNDC3A-203ENST00000484074 YTHDC1Q96MU7 727 aaKnown RBP5.72□□□□□ -1.49
FNDC3A-203ENST00000484074 NPM1P06748 294 aaKnown RBP eCLIP5.71□□□□□ -1.49
FNDC3A-203ENST00000484074 ZEB1P37275 1124 aaPredicted RBP5.71□□□□□ -1.49
FNDC3A-203ENST00000484074 RTN4Q9NQC3 1192 aaKnown RBP5.71□□□□□ -1.5
FNDC3A-203ENST00000484074 BCL11AQ9H165 835 aa5.7□□□□□ -1.5
FNDC3A-203ENST00000484074 PRKCSHP14314 528 aaPredicted RBP5.7□□□□□ -1.5
FNDC3A-203ENST00000484074 TRIM52Q96A61 297 aa5.7□□□□□ -1.5
FNDC3A-203ENST00000484074 NPM2Q86SE8 214 aaKnown RBP5.65□□□□□ -1.5
FNDC3A-203ENST00000484074 EIF5BO60841 1220 aaKnown RBP5.65□□□□□ -1.51
FNDC3A-203ENST00000484074 CANXP27824 592 aaKnown RBP5.65□□□□□ -1.51
FNDC3A-203ENST00000484074 FAM50AQ14320 339 aaKnown RBP5.64□□□□□ -1.51
FNDC3A-203ENST00000484074 ZNF326Q5BKZ1 582 aaKnown RBP5.64□□□□□ -1.51
FNDC3A-203ENST00000484074 PPARGC1BQ86YN6 1023 aaKnown RBP5.64□□□□□ -1.51
FNDC3A-203ENST00000484074 HAP1P54257 671 aaPredicted RBP5.63□□□□□ -1.51
FNDC3A-203ENST00000484074 CHGAP10645 457 aaKnown RBP5.62□□□□□ -1.51
FNDC3A-203ENST00000484074 CDK11BP21127 795 aaKnown RBP5.61□□□□□ -1.51
FNDC3A-203ENST00000484074 C14orf37Q86TY3 774 aa5.61□□□□□ -1.51
FNDC3A-203ENST00000484074 CDK11AQ9UQ88 783 aaPredicted RBP5.61□□□□□ -1.51
FNDC3A-203ENST00000484074 PABPN1Q86U42 306 aaKnown RBP eCLIP5.61□□□□□ -1.51
FNDC3A-203ENST00000484074 NCBP3Q53F19 620 aaKnown RBP5.6□□□□□ -1.51
FNDC3A-203ENST00000484074 ZBTB7CA1YPR0 619 aa5.59□□□□□ -1.51
FNDC3A-203ENST00000484074 PLEKHG5O94827 1062 aa5.57□□□□□ -1.52
FNDC3A-203ENST00000484074 ZNF777Q9ULD5 760 aaPredicted RBP5.57□□□□□ -1.52
FNDC3A-203ENST00000484074 ARID3CA6NKF2 412 aa5.57□□□□□ -1.52
FNDC3A-203ENST00000484074 RTL5Q5HYW3 569 aaPredicted RBP5.56□□□□□ -1.52
FNDC3A-203ENST00000484074 NPHP1O15259 732 aa5.56□□□□□ -1.52
FNDC3A-203ENST00000484074 ARID4BQ4LE39 1312 aaPredicted RBP5.56□□□□□ -1.52
FNDC3A-203ENST00000484074 AMER1Q5JTC6 1135 aaPredicted RBP5.56□□□□□ -1.52
FNDC3A-203ENST00000484074 TULP1O00294 542 aaPredicted RBP5.56□□□□□ -1.52
FNDC3A-203ENST00000484074 TRHP20396 242 aaPredicted RBP5.55□□□□□ -1.52
FNDC3A-203ENST00000484074 AEBP2Q6ZN18 517 aaPredicted RBP5.53□□□□□ -1.52
FNDC3A-203ENST00000484074 NEUROD1Q13562 356 aa5.53□□□□□ -1.52
FNDC3A-203ENST00000484074 ARXQ96QS3 562 aa5.52□□□□□ -1.53
FNDC3A-203ENST00000484074 SENP3Q9H4L4 574 aaPredicted RBP5.52□□□□□ -1.53
FNDC3A-203ENST00000484074 PPP1R15AO75807 674 aaPredicted RBP5.52□□□□□ -1.53
FNDC3A-203ENST00000484074 ABCC9O60706 1549 aa5.5□□□□□ -1.53
FNDC3A-203ENST00000484074 PODXL2Q9NZ53 605 aa5.5□□□□□ -1.53
FNDC3A-203ENST00000484074 DCAF8L1A6NGE4 600 aa5.46□□□□□ -1.54
FNDC3A-203ENST00000484074 HSP90AA1P07900 732 aaKnown RBP5.46□□□□□ -1.54
FNDC3A-203ENST00000484074 P3H3Q8IVL6 736 aa5.46□□□□□ -1.54
FNDC3A-203ENST00000484074 HOMEZQ8IX15 550 aa5.46□□□□□ -1.54
FNDC3A-203ENST00000484074 TPRNQ4KMQ1 711 aa5.45□□□□□ -1.54
FNDC3A-203ENST00000484074 KRI1Q8N9T8 703 aaKnown RBP5.45□□□□□ -1.54
FNDC3A-203ENST00000484074 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.45□□□□□ -1.543e-6■■□□□ 11.5
FNDC3A-203ENST00000484074 LMOD2Q6P5Q4 547 aa5.45□□□□□ -1.54
FNDC3A-203ENST00000484074 TIMELESSQ9UNS1 1208 aa5.44□□□□□ -1.54
FNDC3A-203ENST00000484074 ANP32BQ92688 251 aaKnown RBP5.44□□□□□ -1.54
FNDC3A-203ENST00000484074 ANP32CO43423 234 aa5.44□□□□□ -1.54
FNDC3A-203ENST00000484074 GOLGA2Q08379 1002 aa5.42□□□□□ -1.54
FNDC3A-203ENST00000484074 TMX4Q9H1E5 349 aaPredicted RBP5.42□□□□□ -1.54
FNDC3A-203ENST00000484074 CHMP7Q8WUX9 453 aaPredicted RBP5.41□□□□□ -1.54
FNDC3A-203ENST00000484074 CLSTN1O94985 981 aa5.41□□□□□ -1.54
FNDC3A-203ENST00000484074 KCNA4P22459 653 aa5.41□□□□□ -1.54
FNDC3A-203ENST00000484074 TRIM26Q12899 539 aaPredicted RBP5.41□□□□□ -1.54
FNDC3A-203ENST00000484074 MYH16Q9H6N6 1097 aa5.4□□□□□ -1.54
FNDC3A-203ENST00000484074 UPF2Q9HAU5 1272 aaKnown RBP5.39□□□□□ -1.55
FNDC3A-203ENST00000484074 CCDC9Q9Y3X0 531 aaKnown RBP5.38□□□□□ -1.55
FNDC3A-203ENST00000484074 EIF4G2P78344 907 aaKnown RBP eCLIP5.38□□□□□ -1.55
FNDC3A-203ENST00000484074 KCNH8Q96L42 1107 aa5.38□□□□□ -1.55
FNDC3A-203ENST00000484074 PHF23Q9BUL5 403 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms