Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC14.43□□□□□ -0.1
RAB4AP20338 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB4AP20338 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB4AP20338 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB4AP20338 CPT2-209ENST00000636935 803 ntTSL 5 BASIC14.43□□□□□ -0.1
RAB4AP20338 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB4AP20338 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB4AP20338 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB4AP20338 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB4AP20338 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.43□□□□□ -0.1
RAB4AP20338 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC14.43□□□□□ -0.1
RAB4AP20338 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB4AP20338 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB4AP20338 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RAB4AP20338 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
RAB4AP20338 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC14.43□□□□□ -0.1
RAB4AP20338 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB4AP20338 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RAB4AP20338 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB4AP20338 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB4AP20338 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB4AP20338 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB4AP20338 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB4AP20338 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB4AP20338 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB4AP20338 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB4AP20338 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB4AP20338 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RAB4AP20338 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RAB4AP20338 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB4AP20338 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RAB4AP20338 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB4AP20338 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB4AP20338 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB4AP20338 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB4AP20338 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB4AP20338 MPST-208ENST00000628507 698 ntTSL 5 BASIC14.42□□□□□ -0.1
RAB4AP20338 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB4AP20338 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RAB4AP20338 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB4AP20338 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC14.42□□□□□ -0.1
RAB4AP20338 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RAB4AP20338 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
RAB4AP20338 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB4AP20338 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB4AP20338 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB4AP20338 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB4AP20338 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB4AP20338 EFTUD1P1-204ENST00000560401 1798 ntBASIC14.42□□□□□ -0.1
RAB4AP20338 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC14.42□□□□□ -0.1
RAB4AP20338 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB4AP20338 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB4AP20338 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB4AP20338 MIR600HG-201ENST00000449175 5984 ntBASIC14.41□□□□□ -0.1
RAB4AP20338 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB4AP20338 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.41□□□□□ -0.1
RAB4AP20338 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB4AP20338 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB4AP20338 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB4AP20338 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB4AP20338 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB4AP20338 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB4AP20338 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB4AP20338 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB4AP20338 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB4AP20338 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB4AP20338 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RAB4AP20338 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB4AP20338 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB4AP20338 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB4AP20338 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB4AP20338 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB4AP20338 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.41□□□□□ -0.1
RAB4AP20338 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RAB4AP20338 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB4AP20338 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB4AP20338 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB4AP20338 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB4AP20338 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB4AP20338 AC138907.5-202ENST00000569484 235 ntBASIC14.41□□□□□ -0.1
RAB4AP20338 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB4AP20338 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RAB4AP20338 FAM21FP-204ENST00000608637 956 ntBASIC14.41□□□□□ -0.1
RAB4AP20338 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB4AP20338 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC14.41□□□□□ -0.1
RAB4AP20338 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB4AP20338 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB4AP20338 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RAB4AP20338 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RAB4AP20338 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB4AP20338 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.41□□□□□ -0.1
RAB4AP20338 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB4AP20338 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB4AP20338 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB4AP20338 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB4AP20338 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
RAB4AP20338 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB4AP20338 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB4AP20338 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RAB4AP20338 USP49-202ENST00000373010 2446 ntTSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms