Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14.95□□□□□ -0.02
PF4V1P10720 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
PF4V1P10720 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC14.95□□□□□ -0.02
PF4V1P10720 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
PF4V1P10720 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
PF4V1P10720 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PF4V1P10720 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC14.95□□□□□ -0.02
PF4V1P10720 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PF4V1P10720 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PF4V1P10720 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PF4V1P10720 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
PF4V1P10720 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PF4V1P10720 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PF4V1P10720 AC008040.2-201ENST00000461049 708 ntBASIC14.95□□□□□ -0.02
PF4V1P10720 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC14.95□□□□□ -0.02
PF4V1P10720 AC010203.1-204ENST00000548782 407 ntBASIC14.95□□□□□ -0.02
PF4V1P10720 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PF4V1P10720 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
PF4V1P10720 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PF4V1P10720 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PF4V1P10720 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PF4V1P10720 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC14.95□□□□□ -0.02
PF4V1P10720 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC14.95□□□□□ -0.02
PF4V1P10720 AC093484.2-201ENST00000580996 2166 ntBASIC14.95□□□□□ -0.02
PF4V1P10720 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PF4V1P10720 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
PF4V1P10720 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PF4V1P10720 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
PF4V1P10720 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PF4V1P10720 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
PF4V1P10720 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
PF4V1P10720 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PF4V1P10720 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PF4V1P10720 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
PF4V1P10720 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PF4V1P10720 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PF4V1P10720 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PF4V1P10720 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PF4V1P10720 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC14.94□□□□□ -0.02
PF4V1P10720 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC14.94□□□□□ -0.02
PF4V1P10720 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
PF4V1P10720 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PF4V1P10720 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PF4V1P10720 OR6D1P-202ENST00000641007 5290 ntBASIC14.94□□□□□ -0.02
PF4V1P10720 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PF4V1P10720 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PF4V1P10720 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
PF4V1P10720 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PF4V1P10720 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PF4V1P10720 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PF4V1P10720 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PF4V1P10720 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PF4V1P10720 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC14.94□□□□□ -0.02
PF4V1P10720 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC14.94□□□□□ -0.02
PF4V1P10720 TSPY21P-201ENST00000433481 731 ntBASIC14.94□□□□□ -0.02
PF4V1P10720 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PF4V1P10720 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.94□□□□□ -0.02
PF4V1P10720 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC14.94□□□□□ -0.02
PF4V1P10720 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
PF4V1P10720 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC14.94□□□□□ -0.02
PF4V1P10720 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC14.94□□□□□ -0.02
PF4V1P10720 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PF4V1P10720 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC14.94□□□□□ -0.02
PF4V1P10720 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PF4V1P10720 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
PF4V1P10720 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PF4V1P10720 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
PF4V1P10720 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PF4V1P10720 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PF4V1P10720 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PF4V1P10720 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PF4V1P10720 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PF4V1P10720 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PF4V1P10720 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.93□□□□□ -0.02
PF4V1P10720 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PF4V1P10720 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.93□□□□□ -0.02
PF4V1P10720 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PF4V1P10720 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PF4V1P10720 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PF4V1P10720 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PF4V1P10720 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
PF4V1P10720 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PF4V1P10720 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PF4V1P10720 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC14.93□□□□□ -0.02
PF4V1P10720 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
PF4V1P10720 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
PF4V1P10720 HMGA1P5-201ENST00000412453 271 ntBASIC14.93□□□□□ -0.02
PF4V1P10720 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC14.93□□□□□ -0.02
PF4V1P10720 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PF4V1P10720 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.93□□□□□ -0.02
PF4V1P10720 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
PF4V1P10720 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PF4V1P10720 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PF4V1P10720 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PF4V1P10720 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
PF4V1P10720 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PF4V1P10720 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PF4V1P10720 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PF4V1P10720 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PF4V1P10720 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms