Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
THBS1P07996 AC009113.1-201ENST00000570267 2443 ntBASIC17.37■□□□□ 0.37
THBS1P07996 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.37■□□□□ 0.37
THBS1P07996 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
THBS1P07996 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.36■□□□□ 0.37
THBS1P07996 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
THBS1P07996 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
THBS1P07996 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.36■□□□□ 0.37
THBS1P07996 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
THBS1P07996 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
THBS1P07996 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
THBS1P07996 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
THBS1P07996 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
THBS1P07996 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.36■□□□□ 0.37
THBS1P07996 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
THBS1P07996 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.36■□□□□ 0.37
THBS1P07996 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
THBS1P07996 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.36■□□□□ 0.37
THBS1P07996 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.36■□□□□ 0.37
THBS1P07996 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.36■□□□□ 0.37
THBS1P07996 CKBP1-201ENST00000565489 1086 ntBASIC17.36■□□□□ 0.37
THBS1P07996 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
THBS1P07996 AC130371.2-201ENST00000619443 611 ntBASIC17.36■□□□□ 0.37
THBS1P07996 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
THBS1P07996 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
THBS1P07996 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.36■□□□□ 0.37
THBS1P07996 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
THBS1P07996 AC005082.1-201ENST00000413042 2259 ntBASIC17.36■□□□□ 0.37
THBS1P07996 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.36■□□□□ 0.37
THBS1P07996 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
THBS1P07996 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.36■□□□□ 0.37
THBS1P07996 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
THBS1P07996 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
THBS1P07996 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
THBS1P07996 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
THBS1P07996 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
THBS1P07996 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
THBS1P07996 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
THBS1P07996 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
THBS1P07996 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
THBS1P07996 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
THBS1P07996 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
THBS1P07996 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
THBS1P07996 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
THBS1P07996 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
THBS1P07996 FAM207BP-201ENST00000447172 505 ntBASIC17.35■□□□□ 0.37
THBS1P07996 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.35■□□□□ 0.37
THBS1P07996 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
THBS1P07996 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.35■□□□□ 0.37
THBS1P07996 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.35■□□□□ 0.37
THBS1P07996 MIR6786-201ENST00000616843 113 ntBASIC17.35■□□□□ 0.37
THBS1P07996 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.35■□□□□ 0.37
THBS1P07996 AC079598.2-202ENST00000546624 1451 ntBASIC17.35■□□□□ 0.37
THBS1P07996 MTMR9LP-203ENST00000426597 1545 ntBASIC17.35■□□□□ 0.37
THBS1P07996 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
THBS1P07996 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
THBS1P07996 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.35■□□□□ 0.37
THBS1P07996 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
THBS1P07996 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
THBS1P07996 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
THBS1P07996 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.35■□□□□ 0.37
THBS1P07996 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.35■□□□□ 0.37
THBS1P07996 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
THBS1P07996 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
THBS1P07996 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.35■□□□□ 0.37
THBS1P07996 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.34■□□□□ 0.37
THBS1P07996 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
THBS1P07996 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
THBS1P07996 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
THBS1P07996 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
THBS1P07996 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.34■□□□□ 0.37
THBS1P07996 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
THBS1P07996 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
THBS1P07996 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
THBS1P07996 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
THBS1P07996 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
THBS1P07996 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
THBS1P07996 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.34■□□□□ 0.37
THBS1P07996 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
THBS1P07996 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
THBS1P07996 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
THBS1P07996 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
THBS1P07996 MIR718-201ENST00000390190 70 ntBASIC17.34■□□□□ 0.37
THBS1P07996 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.34■□□□□ 0.37
THBS1P07996 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
THBS1P07996 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.34■□□□□ 0.37
THBS1P07996 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.34■□□□□ 0.37
THBS1P07996 AC008040.2-201ENST00000461049 708 ntBASIC17.34■□□□□ 0.37
THBS1P07996 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
THBS1P07996 B3GAT3P1-201ENST00000471720 806 ntBASIC17.34■□□□□ 0.37
THBS1P07996 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.34■□□□□ 0.37
THBS1P07996 FSCN1P1-201ENST00000568912 1481 ntBASIC17.34■□□□□ 0.37
THBS1P07996 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
THBS1P07996 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.34■□□□□ 0.37
THBS1P07996 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.34■□□□□ 0.37
THBS1P07996 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
THBS1P07996 AC073592.3-201ENST00000625118 1834 ntBASIC17.34■□□□□ 0.37
THBS1P07996 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.34■□□□□ 0.37
THBS1P07996 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
THBS1P07996 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms