Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.17■□□□□ 0.98
ACTN4O43707 KRT8P3-201ENST00000519669 1449 ntBASIC21.17■□□□□ 0.98
ACTN4O43707 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ACTN4O43707 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ACTN4O43707 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ACTN4O43707 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC21.17■□□□□ 0.98
ACTN4O43707 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ACTN4O43707 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
ACTN4O43707 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ACTN4O43707 AC126763.1-201ENST00000552015 2118 ntBASIC21.17■□□□□ 0.98
ACTN4O43707 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.17■□□□□ 0.98
ACTN4O43707 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ACTN4O43707 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ACTN4O43707 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC21.16■□□□□ 0.98
ACTN4O43707 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ACTN4O43707 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ACTN4O43707 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.16■□□□□ 0.98
ACTN4O43707 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ACTN4O43707 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
ACTN4O43707 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
ACTN4O43707 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ACTN4O43707 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.16■□□□□ 0.98
ACTN4O43707 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ACTN4O43707 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ACTN4O43707 AC011506.1-201ENST00000474329 610 ntBASIC21.16■□□□□ 0.98
ACTN4O43707 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.16■□□□□ 0.98
ACTN4O43707 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.16■□□□□ 0.98
ACTN4O43707 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.16■□□□□ 0.98
ACTN4O43707 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.16■□□□□ 0.98
ACTN4O43707 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ACTN4O43707 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC21.16■□□□□ 0.98
ACTN4O43707 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ACTN4O43707 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ACTN4O43707 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
ACTN4O43707 AL499627.1-201ENST00000569373 2188 ntBASIC21.16■□□□□ 0.98
ACTN4O43707 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ACTN4O43707 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ACTN4O43707 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
ACTN4O43707 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.15■□□□□ 0.98
ACTN4O43707 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ACTN4O43707 MESTP1-201ENST00000404287 994 ntBASIC21.15■□□□□ 0.98
ACTN4O43707 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ACTN4O43707 TSPY20P-201ENST00000450910 630 ntBASIC21.15■□□□□ 0.98
ACTN4O43707 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.15■□□□□ 0.98
ACTN4O43707 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
ACTN4O43707 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ACTN4O43707 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.15■□□□□ 0.98
ACTN4O43707 AC011298.2-201ENST00000617989 482 ntBASIC21.15■□□□□ 0.98
ACTN4O43707 AC130371.2-201ENST00000619443 611 ntBASIC21.15■□□□□ 0.98
ACTN4O43707 ITM2C-210ENST00000620962 501 ntBASIC21.15■□□□□ 0.98
ACTN4O43707 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ACTN4O43707 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
ACTN4O43707 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ACTN4O43707 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
ACTN4O43707 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ACTN4O43707 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ACTN4O43707 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ACTN4O43707 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
ACTN4O43707 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ACTN4O43707 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
ACTN4O43707 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ACTN4O43707 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
ACTN4O43707 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ACTN4O43707 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ACTN4O43707 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ACTN4O43707 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ACTN4O43707 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ACTN4O43707 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ACTN4O43707 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
ACTN4O43707 AC073195.1-201ENST00000607241 877 ntBASIC21.14■□□□□ 0.97
ACTN4O43707 AL031985.4-201ENST00000642138 673 ntBASIC21.14■□□□□ 0.97
ACTN4O43707 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ACTN4O43707 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.14■□□□□ 0.97
ACTN4O43707 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
ACTN4O43707 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ACTN4O43707 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ACTN4O43707 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
ACTN4O43707 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.14■□□□□ 0.97
ACTN4O43707 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC21.14■□□□□ 0.97
ACTN4O43707 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
ACTN4O43707 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ACTN4O43707 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ACTN4O43707 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ACTN4O43707 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ACTN4O43707 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.13■□□□□ 0.97
ACTN4O43707 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ACTN4O43707 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ACTN4O43707 AC073592.3-201ENST00000625118 1834 ntBASIC21.13■□□□□ 0.97
ACTN4O43707 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ACTN4O43707 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.13■□□□□ 0.97
ACTN4O43707 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ACTN4O43707 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ACTN4O43707 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ACTN4O43707 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ACTN4O43707 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21.13■□□□□ 0.97
ACTN4O43707 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ACTN4O43707 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ACTN4O43707 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
ACTN4O43707 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ACTN4O43707 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms