Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SPHK1Q9NYA1 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SPHK1Q9NYA1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.19■□□□□ 0.5
SPHK1Q9NYA1 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SPHK1Q9NYA1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SPHK1Q9NYA1 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SPHK1Q9NYA1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SPHK1Q9NYA1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SPHK1Q9NYA1 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.19■□□□□ 0.5
SPHK1Q9NYA1 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SPHK1Q9NYA1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPHK1Q9NYA1 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPHK1Q9NYA1 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPHK1Q9NYA1 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPHK1Q9NYA1 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.18■□□□□ 0.5
SPHK1Q9NYA1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPHK1Q9NYA1 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPHK1Q9NYA1 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPHK1Q9NYA1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SPHK1Q9NYA1 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SPHK1Q9NYA1 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPHK1Q9NYA1 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SPHK1Q9NYA1 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.18■□□□□ 0.5
SPHK1Q9NYA1 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.18■□□□□ 0.5
SPHK1Q9NYA1 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.18■□□□□ 0.5
SPHK1Q9NYA1 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.18■□□□□ 0.5
SPHK1Q9NYA1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.18■□□□□ 0.5
SPHK1Q9NYA1 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.18■□□□□ 0.5
SPHK1Q9NYA1 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPHK1Q9NYA1 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SPHK1Q9NYA1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SPHK1Q9NYA1 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.18■□□□□ 0.5
SPHK1Q9NYA1 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
SPHK1Q9NYA1 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPHK1Q9NYA1 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
SPHK1Q9NYA1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.18■□□□□ 0.5
SPHK1Q9NYA1 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.18■□□□□ 0.5
SPHK1Q9NYA1 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPHK1Q9NYA1 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SPHK1Q9NYA1 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPHK1Q9NYA1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPHK1Q9NYA1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SPHK1Q9NYA1 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SPHK1Q9NYA1 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SPHK1Q9NYA1 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SPHK1Q9NYA1 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SPHK1Q9NYA1 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SPHK1Q9NYA1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SPHK1Q9NYA1 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SPHK1Q9NYA1 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SPHK1Q9NYA1 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.17■□□□□ 0.5
SPHK1Q9NYA1 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SPHK1Q9NYA1 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SPHK1Q9NYA1 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SPHK1Q9NYA1 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SPHK1Q9NYA1 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SPHK1Q9NYA1 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.17■□□□□ 0.5
SPHK1Q9NYA1 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SPHK1Q9NYA1 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SPHK1Q9NYA1 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
SPHK1Q9NYA1 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.17■□□□□ 0.5
SPHK1Q9NYA1 CR769767.2-201ENST00000622735 460 ntBASIC18.17■□□□□ 0.5
SPHK1Q9NYA1 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.17■□□□□ 0.5
SPHK1Q9NYA1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SPHK1Q9NYA1 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SPHK1Q9NYA1 RCC2P3-201ENST00000418112 1537 ntBASIC18.17■□□□□ 0.5
SPHK1Q9NYA1 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SPHK1Q9NYA1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SPHK1Q9NYA1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SPHK1Q9NYA1 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SPHK1Q9NYA1 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SPHK1Q9NYA1 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.17■□□□□ 0.5
SPHK1Q9NYA1 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
SPHK1Q9NYA1 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SPHK1Q9NYA1 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SPHK1Q9NYA1 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SPHK1Q9NYA1 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SPHK1Q9NYA1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SPHK1Q9NYA1 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SPHK1Q9NYA1 KRT8P32-201ENST00000512863 1461 ntBASIC18.16■□□□□ 0.5
SPHK1Q9NYA1 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SPHK1Q9NYA1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SPHK1Q9NYA1 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SPHK1Q9NYA1 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
SPHK1Q9NYA1 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.16■□□□□ 0.5
SPHK1Q9NYA1 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SPHK1Q9NYA1 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.16■□□□□ 0.5
SPHK1Q9NYA1 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.16■□□□□ 0.5
SPHK1Q9NYA1 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.16■□□□□ 0.5
SPHK1Q9NYA1 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
SPHK1Q9NYA1 AC141257.4-201ENST00000634557 245 ntBASIC18.16■□□□□ 0.5
SPHK1Q9NYA1 AC136944.6-201ENST00000634818 245 ntBASIC18.16■□□□□ 0.5
SPHK1Q9NYA1 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SPHK1Q9NYA1 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.16■□□□□ 0.5
SPHK1Q9NYA1 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SPHK1Q9NYA1 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.16■□□□□ 0.5
SPHK1Q9NYA1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SPHK1Q9NYA1 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SPHK1Q9NYA1 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SPHK1Q9NYA1 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms