Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC52A3Q9NQ40 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC52A3Q9NQ40 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC52A3Q9NQ40 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC52A3Q9NQ40 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.91■□□□□ 0.46
SLC52A3Q9NQ40 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC52A3Q9NQ40 POM121L13P-201ENST00000422362 380 ntBASIC17.91■□□□□ 0.46
SLC52A3Q9NQ40 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
SLC52A3Q9NQ40 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC52A3Q9NQ40 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.91■□□□□ 0.46
SLC52A3Q9NQ40 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.91■□□□□ 0.46
SLC52A3Q9NQ40 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SLC52A3Q9NQ40 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.91■□□□□ 0.46
SLC52A3Q9NQ40 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC52A3Q9NQ40 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC52A3Q9NQ40 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC52A3Q9NQ40 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
SLC52A3Q9NQ40 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC52A3Q9NQ40 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
SLC52A3Q9NQ40 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC52A3Q9NQ40 NBPF21P-201ENST00000425093 1451 ntBASIC17.9■□□□□ 0.46
SLC52A3Q9NQ40 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC52A3Q9NQ40 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.9■□□□□ 0.46
SLC52A3Q9NQ40 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SLC52A3Q9NQ40 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.9■□□□□ 0.46
SLC52A3Q9NQ40 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC52A3Q9NQ40 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.9■□□□□ 0.46
SLC52A3Q9NQ40 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC52A3Q9NQ40 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC52A3Q9NQ40 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SLC52A3Q9NQ40 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC52A3Q9NQ40 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC52A3Q9NQ40 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC52A3Q9NQ40 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC52A3Q9NQ40 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC52A3Q9NQ40 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.9■□□□□ 0.46
SLC52A3Q9NQ40 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC52A3Q9NQ40 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SLC52A3Q9NQ40 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SLC52A3Q9NQ40 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC52A3Q9NQ40 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC52A3Q9NQ40 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.89■□□□□ 0.46
SLC52A3Q9NQ40 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.89■□□□□ 0.46
SLC52A3Q9NQ40 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.46
SLC52A3Q9NQ40 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.89■□□□□ 0.46
SLC52A3Q9NQ40 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.46
SLC52A3Q9NQ40 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.89■□□□□ 0.45
SLC52A3Q9NQ40 AC020916.1-201ENST00000587762 1774 ntBASIC17.89■□□□□ 0.45
SLC52A3Q9NQ40 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC52A3Q9NQ40 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
SLC52A3Q9NQ40 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC52A3Q9NQ40 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC52A3Q9NQ40 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC52A3Q9NQ40 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.89■□□□□ 0.45
SLC52A3Q9NQ40 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.89■□□□□ 0.45
SLC52A3Q9NQ40 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.89■□□□□ 0.45
SLC52A3Q9NQ40 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.89■□□□□ 0.45
SLC52A3Q9NQ40 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC52A3Q9NQ40 AC008403.3-201ENST00000598924 454 ntBASIC17.89■□□□□ 0.45
SLC52A3Q9NQ40 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SLC52A3Q9NQ40 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
SLC52A3Q9NQ40 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
SLC52A3Q9NQ40 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.89■□□□□ 0.45
SLC52A3Q9NQ40 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC52A3Q9NQ40 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC52A3Q9NQ40 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC52A3Q9NQ40 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC52A3Q9NQ40 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC52A3Q9NQ40 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC52A3Q9NQ40 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC52A3Q9NQ40 AC093677.2-201ENST00000600169 1863 ntBASIC17.88■□□□□ 0.45
SLC52A3Q9NQ40 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC52A3Q9NQ40 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC52A3Q9NQ40 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC52A3Q9NQ40 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC52A3Q9NQ40 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC52A3Q9NQ40 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC52A3Q9NQ40 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC52A3Q9NQ40 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SLC52A3Q9NQ40 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC52A3Q9NQ40 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC52A3Q9NQ40 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC52A3Q9NQ40 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC52A3Q9NQ40 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC52A3Q9NQ40 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
SLC52A3Q9NQ40 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC52A3Q9NQ40 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC52A3Q9NQ40 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC52A3Q9NQ40 KRT8P11-201ENST00000409686 1436 ntBASIC17.88■□□□□ 0.45
SLC52A3Q9NQ40 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC52A3Q9NQ40 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.88■□□□□ 0.45
SLC52A3Q9NQ40 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC52A3Q9NQ40 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
SLC52A3Q9NQ40 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SLC52A3Q9NQ40 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC52A3Q9NQ40 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SLC52A3Q9NQ40 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC52A3Q9NQ40 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC52A3Q9NQ40 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC52A3Q9NQ40 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms