Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NUP35Q8NFH5 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC14.14□□□□□ -0.15
NUP35Q8NFH5 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NUP35Q8NFH5 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.14□□□□□ -0.15
NUP35Q8NFH5 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
NUP35Q8NFH5 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 EDA-201ENST00000338901 1233 ntBASIC14.13□□□□□ -0.15
NUP35Q8NFH5 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 NME4-202ENST00000382940 766 ntTSL 3 BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 MIR939-201ENST00000401314 82 ntBASIC14.13□□□□□ -0.15
NUP35Q8NFH5 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 AC091305.1-201ENST00000479476 895 ntBASIC14.13□□□□□ -0.15
NUP35Q8NFH5 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 NME4-211ENST00000620944 1193 ntTSL 2 BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP35Q8NFH5 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NUP35Q8NFH5 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NUP35Q8NFH5 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NUP35Q8NFH5 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NUP35Q8NFH5 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NUP35Q8NFH5 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NUP35Q8NFH5 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NUP35Q8NFH5 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NUP35Q8NFH5 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NUP35Q8NFH5 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
NUP35Q8NFH5 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NUP35Q8NFH5 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.12□□□□□ -0.15
NUP35Q8NFH5 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.12□□□□□ -0.15
NUP35Q8NFH5 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NUP35Q8NFH5 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
NUP35Q8NFH5 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC14.12□□□□□ -0.15
NUP35Q8NFH5 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NUP35Q8NFH5 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NUP35Q8NFH5 MCRIP2P1-201ENST00000394346 511 ntBASIC14.12□□□□□ -0.15
NUP35Q8NFH5 SLC25A6P5-201ENST00000435663 894 ntBASIC14.12□□□□□ -0.15
NUP35Q8NFH5 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NUP35Q8NFH5 PBX1-209ENST00000485769 834 ntTSL 2 BASIC14.12□□□□□ -0.15
NUP35Q8NFH5 AF213884.3-201ENST00000563833 479 ntBASIC14.12□□□□□ -0.15
NUP35Q8NFH5 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC14.12□□□□□ -0.15
NUP35Q8NFH5 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NUP35Q8NFH5 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
NUP35Q8NFH5 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NUP35Q8NFH5 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NUP35Q8NFH5 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NUP35Q8NFH5 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
NUP35Q8NFH5 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NUP35Q8NFH5 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NUP35Q8NFH5 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NUP35Q8NFH5 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NUP35Q8NFH5 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC14.12□□□□□ -0.15
NUP35Q8NFH5 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NUP35Q8NFH5 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.12□□□□□ -0.15
NUP35Q8NFH5 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NUP35Q8NFH5 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
NUP35Q8NFH5 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NUP35Q8NFH5 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
NUP35Q8NFH5 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC14.11□□□□□ -0.15
NUP35Q8NFH5 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NUP35Q8NFH5 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NUP35Q8NFH5 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
NUP35Q8NFH5 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC14.11□□□□□ -0.15
NUP35Q8NFH5 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NUP35Q8NFH5 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NUP35Q8NFH5 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NUP35Q8NFH5 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NUP35Q8NFH5 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NUP35Q8NFH5 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms