Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 RHEB-204ENST00000472642 900 ntTSL 3 BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 ANKRD20A6P-201ENST00000618763 204 ntBASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 MYC-209ENST00000641252 345 ntBASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 HEIH-201ENST00000623091 1652 ntBASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 GOLGA6L5P-202ENST00000515341 1828 ntBASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 MIR663A-201ENST00000385250 93 ntBASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 SLC29A4P1-201ENST00000398760 971 ntBASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 CDCA4P2-201ENST00000441182 718 ntBASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 SLC29A4P2-201ENST00000504749 1089 ntBASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 PRKY-204ENST00000533551 1019 ntBASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 TK2-208ENST00000545043 1120 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 RGMA-211ENST00000557420 989 ntTSL 3 BASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 AC008687.6-201ENST00000596318 630 ntBASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 AC112777.1-201ENST00000540175 1423 ntBASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01561Q8N1V8 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
LINC01561Q8N1V8 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01561Q8N1V8 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01561Q8N1V8 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01561Q8N1V8 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC12.67□□□□□ -0.38
LINC01561Q8N1V8 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC12.67□□□□□ -0.38
LINC01561Q8N1V8 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC12.67□□□□□ -0.38
LINC01561Q8N1V8 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
LINC01561Q8N1V8 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC12.67□□□□□ -0.38
LINC01561Q8N1V8 KATNBL1P6-202ENST00000562413 1466 ntBASIC12.67□□□□□ -0.38
LINC01561Q8N1V8 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC12.67□□□□□ -0.38
LINC01561Q8N1V8 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01561Q8N1V8 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
LINC01561Q8N1V8 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01561Q8N1V8 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01561Q8N1V8 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01561Q8N1V8 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01561Q8N1V8 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms