Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
PPP4R3AQ6IN85 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
PPP4R3AQ6IN85 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PPP4R3AQ6IN85 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PPP4R3AQ6IN85 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC21.47■■□□□ 1.03
PPP4R3AQ6IN85 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.47■■□□□ 1.03
PPP4R3AQ6IN85 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PPP4R3AQ6IN85 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PPP4R3AQ6IN85 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PPP4R3AQ6IN85 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.46■■□□□ 1.03
PPP4R3AQ6IN85 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PPP4R3AQ6IN85 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PPP4R3AQ6IN85 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PPP4R3AQ6IN85 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PPP4R3AQ6IN85 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PPP4R3AQ6IN85 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PPP4R3AQ6IN85 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.46■■□□□ 1.03
PPP4R3AQ6IN85 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.46■■□□□ 1.03
PPP4R3AQ6IN85 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.46■■□□□ 1.03
PPP4R3AQ6IN85 CCR12P-201ENST00000446203 998 ntBASIC21.46■■□□□ 1.03
PPP4R3AQ6IN85 TSPY17P-201ENST00000450329 467 ntBASIC21.46■■□□□ 1.03
PPP4R3AQ6IN85 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.46■■□□□ 1.03
PPP4R3AQ6IN85 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PPP4R3AQ6IN85 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
PPP4R3AQ6IN85 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
PPP4R3AQ6IN85 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
PPP4R3AQ6IN85 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.46■■□□□ 1.03
PPP4R3AQ6IN85 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PPP4R3AQ6IN85 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PPP4R3AQ6IN85 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PPP4R3AQ6IN85 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PPP4R3AQ6IN85 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
PPP4R3AQ6IN85 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.45■■□□□ 1.02
PPP4R3AQ6IN85 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PPP4R3AQ6IN85 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.45■■□□□ 1.02
PPP4R3AQ6IN85 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.45■■□□□ 1.02
PPP4R3AQ6IN85 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PPP4R3AQ6IN85 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PPP4R3AQ6IN85 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.45■■□□□ 1.02
PPP4R3AQ6IN85 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
PPP4R3AQ6IN85 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
PPP4R3AQ6IN85 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.45■■□□□ 1.02
PPP4R3AQ6IN85 AC012306.2-201ENST00000609350 630 ntBASIC21.45■■□□□ 1.02
PPP4R3AQ6IN85 AC116562.4-202ENST00000641738 218 ntBASIC21.45■■□□□ 1.02
PPP4R3AQ6IN85 HCG11-201ENST00000411553 5696 ntBASIC21.45■■□□□ 1.02
PPP4R3AQ6IN85 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PPP4R3AQ6IN85 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PPP4R3AQ6IN85 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PPP4R3AQ6IN85 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PPP4R3AQ6IN85 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.45■■□□□ 1.02
PPP4R3AQ6IN85 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
PPP4R3AQ6IN85 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.45■■□□□ 1.02
PPP4R3AQ6IN85 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PPP4R3AQ6IN85 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
PPP4R3AQ6IN85 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.45■■□□□ 1.02
PPP4R3AQ6IN85 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PPP4R3AQ6IN85 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PPP4R3AQ6IN85 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
PPP4R3AQ6IN85 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PPP4R3AQ6IN85 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PPP4R3AQ6IN85 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
PPP4R3AQ6IN85 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PPP4R3AQ6IN85 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
PPP4R3AQ6IN85 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.44■■□□□ 1.02
PPP4R3AQ6IN85 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PPP4R3AQ6IN85 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.44■■□□□ 1.02
PPP4R3AQ6IN85 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PPP4R3AQ6IN85 AC008622.2-201ENST00000617006 1229 ntBASIC21.44■■□□□ 1.02
PPP4R3AQ6IN85 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PPP4R3AQ6IN85 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PPP4R3AQ6IN85 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PPP4R3AQ6IN85 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PPP4R3AQ6IN85 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
PPP4R3AQ6IN85 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
PPP4R3AQ6IN85 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.44■■□□□ 1.02
PPP4R3AQ6IN85 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PPP4R3AQ6IN85 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PPP4R3AQ6IN85 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PPP4R3AQ6IN85 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PPP4R3AQ6IN85 BX323043.1-201ENST00000641006 1765 ntBASIC21.43■■□□□ 1.02
PPP4R3AQ6IN85 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PPP4R3AQ6IN85 AL512353.2-201ENST00000448759 1962 ntBASIC21.43■■□□□ 1.02
PPP4R3AQ6IN85 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
PPP4R3AQ6IN85 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC21.43■■□□□ 1.02
PPP4R3AQ6IN85 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.43■■□□□ 1.02
PPP4R3AQ6IN85 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PPP4R3AQ6IN85 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PPP4R3AQ6IN85 AC007663.1-201ENST00000438948 1240 ntBASIC21.43■■□□□ 1.02
PPP4R3AQ6IN85 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PPP4R3AQ6IN85 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.43■■□□□ 1.02
PPP4R3AQ6IN85 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.43■■□□□ 1.02
PPP4R3AQ6IN85 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
PPP4R3AQ6IN85 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PPP4R3AQ6IN85 AC145285.6-201ENST00000604632 637 ntBASIC21.43■■□□□ 1.02
PPP4R3AQ6IN85 AC010653.2-201ENST00000623505 997 ntBASIC21.43■■□□□ 1.02
PPP4R3AQ6IN85 AC097493.4-201ENST00000641197 219 ntBASIC21.43■■□□□ 1.02
PPP4R3AQ6IN85 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PPP4R3AQ6IN85 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PPP4R3AQ6IN85 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
PPP4R3AQ6IN85 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms