Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN20P56880 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN20P56880 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.32■□□□□ 0.36
CLDN20P56880 AL390955.1-201ENST00000428694 934 ntBASIC17.32■□□□□ 0.36
CLDN20P56880 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.32■□□□□ 0.36
CLDN20P56880 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.32■□□□□ 0.36
CLDN20P56880 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.32■□□□□ 0.36
CLDN20P56880 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN20P56880 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN20P56880 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CLDN20P56880 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN20P56880 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN20P56880 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.32■□□□□ 0.36
CLDN20P56880 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN20P56880 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CLDN20P56880 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN20P56880 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN20P56880 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN20P56880 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CLDN20P56880 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN20P56880 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN20P56880 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN20P56880 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN20P56880 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.31■□□□□ 0.36
CLDN20P56880 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN20P56880 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN20P56880 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN20P56880 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN20P56880 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN20P56880 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN20P56880 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
CLDN20P56880 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CLDN20P56880 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN20P56880 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CLDN20P56880 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN20P56880 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CLDN20P56880 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN20P56880 MIR1238-201ENST00000408483 83 ntBASIC17.31■□□□□ 0.36
CLDN20P56880 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN20P56880 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN20P56880 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN20P56880 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN20P56880 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN20P56880 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.31■□□□□ 0.36
CLDN20P56880 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN20P56880 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN20P56880 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN20P56880 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
CLDN20P56880 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN20P56880 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN20P56880 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN20P56880 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN20P56880 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN20P56880 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN20P56880 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN20P56880 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.31■□□□□ 0.36
CLDN20P56880 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN20P56880 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN20P56880 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN20P56880 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
CLDN20P56880 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
CLDN20P56880 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN20P56880 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN20P56880 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN20P56880 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN20P56880 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN20P56880 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN20P56880 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN20P56880 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN20P56880 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.3■□□□□ 0.36
CLDN20P56880 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.3■□□□□ 0.36
CLDN20P56880 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.3■□□□□ 0.36
CLDN20P56880 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN20P56880 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CLDN20P56880 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CLDN20P56880 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN20P56880 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
CLDN20P56880 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.3■□□□□ 0.36
CLDN20P56880 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN20P56880 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN20P56880 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CLDN20P56880 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN20P56880 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN20P56880 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN20P56880 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN20P56880 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN20P56880 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CLDN20P56880 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN20P56880 MMP23A-201ENST00000234610 1017 ntBASIC17.29■□□□□ 0.36
CLDN20P56880 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CLDN20P56880 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN20P56880 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN20P56880 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN20P56880 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN20P56880 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN20P56880 AC087499.1-201ENST00000418141 1075 ntBASIC17.29■□□□□ 0.36
CLDN20P56880 FAM207BP-201ENST00000447172 505 ntBASIC17.29■□□□□ 0.36
CLDN20P56880 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN20P56880 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN20P56880 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms