Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.93■□□□□ 0.78
CHRNA3P32297 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHRNA3P32297 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CHRNA3P32297 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHRNA3P32297 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHRNA3P32297 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.93■□□□□ 0.78
CHRNA3P32297 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CHRNA3P32297 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHRNA3P32297 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CHRNA3P32297 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
CHRNA3P32297 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.93■□□□□ 0.78
CHRNA3P32297 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.92■□□□□ 0.78
CHRNA3P32297 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA3P32297 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA3P32297 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
CHRNA3P32297 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA3P32297 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA3P32297 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.92■□□□□ 0.78
CHRNA3P32297 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA3P32297 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA3P32297 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.92■□□□□ 0.78
CHRNA3P32297 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA3P32297 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA3P32297 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA3P32297 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA3P32297 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.92■□□□□ 0.78
CHRNA3P32297 AL353807.1-201ENST00000427475 662 ntBASIC19.92■□□□□ 0.78
CHRNA3P32297 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.92■□□□□ 0.78
CHRNA3P32297 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.92■□□□□ 0.78
CHRNA3P32297 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA3P32297 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA3P32297 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.92■□□□□ 0.78
CHRNA3P32297 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.92■□□□□ 0.78
CHRNA3P32297 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.92■□□□□ 0.78
CHRNA3P32297 FEM1AP3-201ENST00000403722 1741 ntBASIC19.92■□□□□ 0.78
CHRNA3P32297 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA3P32297 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA3P32297 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA3P32297 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA3P32297 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.92■□□□□ 0.78
CHRNA3P32297 AC026471.1-201ENST00000564629 3026 ntBASIC19.92■□□□□ 0.78
CHRNA3P32297 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
CHRNA3P32297 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA3P32297 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA3P32297 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA3P32297 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA3P32297 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA3P32297 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA3P32297 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
CHRNA3P32297 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CHRNA3P32297 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.91■□□□□ 0.78
CHRNA3P32297 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA3P32297 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.91■□□□□ 0.78
CHRNA3P32297 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.91■□□□□ 0.78
CHRNA3P32297 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.91■□□□□ 0.78
CHRNA3P32297 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.91■□□□□ 0.78
CHRNA3P32297 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA3P32297 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA3P32297 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA3P32297 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA3P32297 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA3P32297 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA3P32297 LETM1P2-201ENST00000597330 2178 ntBASIC19.91■□□□□ 0.78
CHRNA3P32297 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA3P32297 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CHRNA3P32297 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA3P32297 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA3P32297 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CHRNA3P32297 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA3P32297 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA3P32297 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA3P32297 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA3P32297 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CHRNA3P32297 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CHRNA3P32297 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CHRNA3P32297 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.9■□□□□ 0.78
CHRNA3P32297 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.9■□□□□ 0.78
CHRNA3P32297 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHRNA3P32297 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHRNA3P32297 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHRNA3P32297 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHRNA3P32297 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHRNA3P32297 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHRNA3P32297 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
CHRNA3P32297 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.9■□□□□ 0.78
CHRNA3P32297 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.9■□□□□ 0.78
CHRNA3P32297 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.9■□□□□ 0.78
CHRNA3P32297 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.9■□□□□ 0.78
CHRNA3P32297 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.9■□□□□ 0.78
CHRNA3P32297 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.9■□□□□ 0.78
CHRNA3P32297 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
CHRNA3P32297 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
CHRNA3P32297 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.9■□□□□ 0.78
CHRNA3P32297 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHRNA3P32297 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHRNA3P32297 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHRNA3P32297 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CHRNA3P32297 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHRNA3P32297 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.9■□□□□ 0.78
CHRNA3P32297 BICD1-207ENST00000551848 1962 ntBASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms