Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
XPAP23025 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.06■□□□□ 0.64
XPAP23025 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
XPAP23025 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
XPAP23025 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
XPAP23025 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
XPAP23025 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
XPAP23025 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.06■□□□□ 0.64
XPAP23025 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.06■□□□□ 0.64
XPAP23025 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.06■□□□□ 0.64
XPAP23025 AC007952.6-201ENST00000573168 2673 ntBASIC19.06■□□□□ 0.64
XPAP23025 AC003957.1-201ENST00000625108 2673 ntBASIC19.06■□□□□ 0.64
XPAP23025 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.06■□□□□ 0.64
XPAP23025 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.06■□□□□ 0.64
XPAP23025 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
XPAP23025 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
XPAP23025 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
XPAP23025 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
XPAP23025 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
XPAP23025 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
XPAP23025 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
XPAP23025 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.06■□□□□ 0.64
XPAP23025 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.06■□□□□ 0.64
XPAP23025 AP003041.3-201ENST00000527151 707 ntBASIC19.06■□□□□ 0.64
XPAP23025 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.06■□□□□ 0.64
XPAP23025 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.06■□□□□ 0.64
XPAP23025 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
XPAP23025 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
XPAP23025 RN7SL850P-201ENST00000579959 291 ntBASIC19.06■□□□□ 0.64
XPAP23025 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
XPAP23025 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
XPAP23025 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
XPAP23025 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.06■□□□□ 0.64
XPAP23025 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
XPAP23025 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.06■□□□□ 0.64
XPAP23025 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
XPAP23025 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
XPAP23025 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
XPAP23025 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
XPAP23025 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.05■□□□□ 0.64
XPAP23025 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
XPAP23025 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
XPAP23025 TEX21P-204ENST00000641479 1693 ntBASIC19.05■□□□□ 0.64
XPAP23025 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
XPAP23025 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
XPAP23025 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
XPAP23025 AC093484.2-201ENST00000580996 2166 ntBASIC19.05■□□□□ 0.64
XPAP23025 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.05■□□□□ 0.64
XPAP23025 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
XPAP23025 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
XPAP23025 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
XPAP23025 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
XPAP23025 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.05■□□□□ 0.64
XPAP23025 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
XPAP23025 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
XPAP23025 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.05■□□□□ 0.64
XPAP23025 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
XPAP23025 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
XPAP23025 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
XPAP23025 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
XPAP23025 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
XPAP23025 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.05■□□□□ 0.64
XPAP23025 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
XPAP23025 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
XPAP23025 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
XPAP23025 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
XPAP23025 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
XPAP23025 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
XPAP23025 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.05■□□□□ 0.64
XPAP23025 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
XPAP23025 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
XPAP23025 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
XPAP23025 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
XPAP23025 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.04■□□□□ 0.64
XPAP23025 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.04■□□□□ 0.64
XPAP23025 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
XPAP23025 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.04■□□□□ 0.64
XPAP23025 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.04■□□□□ 0.64
XPAP23025 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
XPAP23025 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
XPAP23025 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
XPAP23025 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.04■□□□□ 0.64
XPAP23025 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.04■□□□□ 0.64
XPAP23025 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.04■□□□□ 0.64
XPAP23025 AC010203.1-204ENST00000548782 407 ntBASIC19.04■□□□□ 0.64
XPAP23025 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.04■□□□□ 0.64
XPAP23025 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.04■□□□□ 0.64
XPAP23025 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.04■□□□□ 0.64
XPAP23025 AL032819.2-201ENST00000624543 2162 ntBASIC19.04■□□□□ 0.64
XPAP23025 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
XPAP23025 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
XPAP23025 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
XPAP23025 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
XPAP23025 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
XPAP23025 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
XPAP23025 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
XPAP23025 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
XPAP23025 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
XPAP23025 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
XPAP23025 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms