Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NR4A1P22736 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.52■□□□□ 0.4
NR4A1P22736 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
NR4A1P22736 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
NR4A1P22736 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.52■□□□□ 0.4
NR4A1P22736 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NR4A1P22736 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
NR4A1P22736 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NR4A1P22736 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NR4A1P22736 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.52■□□□□ 0.4
NR4A1P22736 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.52■□□□□ 0.4
NR4A1P22736 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.52■□□□□ 0.4
NR4A1P22736 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.52■□□□□ 0.4
NR4A1P22736 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NR4A1P22736 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NR4A1P22736 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
NR4A1P22736 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.52■□□□□ 0.4
NR4A1P22736 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.52■□□□□ 0.39
NR4A1P22736 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NR4A1P22736 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NR4A1P22736 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NR4A1P22736 TNRC18P3-201ENST00000441896 2691 ntBASIC17.52■□□□□ 0.39
NR4A1P22736 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NR4A1P22736 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.52■□□□□ 0.39
NR4A1P22736 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NR4A1P22736 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NR4A1P22736 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NR4A1P22736 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NR4A1P22736 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NR4A1P22736 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NR4A1P22736 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NR4A1P22736 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NR4A1P22736 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
NR4A1P22736 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
NR4A1P22736 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NR4A1P22736 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NR4A1P22736 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NR4A1P22736 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
NR4A1P22736 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.51■□□□□ 0.39
NR4A1P22736 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NR4A1P22736 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
NR4A1P22736 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.51■□□□□ 0.39
NR4A1P22736 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.51■□□□□ 0.39
NR4A1P22736 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NR4A1P22736 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.51■□□□□ 0.39
NR4A1P22736 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.51■□□□□ 0.39
NR4A1P22736 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.51■□□□□ 0.39
NR4A1P22736 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.51■□□□□ 0.39
NR4A1P22736 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.51■□□□□ 0.39
NR4A1P22736 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.51■□□□□ 0.39
NR4A1P22736 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
NR4A1P22736 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NR4A1P22736 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NR4A1P22736 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NR4A1P22736 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NR4A1P22736 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NR4A1P22736 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NR4A1P22736 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NR4A1P22736 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NR4A1P22736 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.5■□□□□ 0.39
NR4A1P22736 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.5■□□□□ 0.39
NR4A1P22736 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NR4A1P22736 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.5■□□□□ 0.39
NR4A1P22736 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.5■□□□□ 0.39
NR4A1P22736 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NR4A1P22736 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.5■□□□□ 0.39
NR4A1P22736 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
NR4A1P22736 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
NR4A1P22736 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
NR4A1P22736 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NR4A1P22736 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.5■□□□□ 0.39
NR4A1P22736 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NR4A1P22736 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NR4A1P22736 RNA5SP413-201ENST00000516373 109 ntBASIC17.5■□□□□ 0.39
NR4A1P22736 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.5■□□□□ 0.39
NR4A1P22736 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.5■□□□□ 0.39
NR4A1P22736 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.5■□□□□ 0.39
NR4A1P22736 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NR4A1P22736 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
NR4A1P22736 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NR4A1P22736 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NR4A1P22736 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.5■□□□□ 0.39
NR4A1P22736 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.5■□□□□ 0.39
NR4A1P22736 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NR4A1P22736 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
NR4A1P22736 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.5■□□□□ 0.39
NR4A1P22736 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
NR4A1P22736 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
NR4A1P22736 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.49■□□□□ 0.39
NR4A1P22736 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.49■□□□□ 0.39
NR4A1P22736 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NR4A1P22736 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NR4A1P22736 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.49■□□□□ 0.39
NR4A1P22736 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
NR4A1P22736 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NR4A1P22736 TEX21P-204ENST00000641479 1693 ntBASIC17.49■□□□□ 0.39
NR4A1P22736 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NR4A1P22736 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NR4A1P22736 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NR4A1P22736 AC008894.3-201ENST00000624324 3103 ntBASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms