Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 AL162741.1-201ENST00000565563 1558 ntBASIC12.94□□□□□ -0.34
NDUFA1O15239 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFA1O15239 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC12.94□□□□□ -0.34
NDUFA1O15239 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC12.94□□□□□ -0.34
NDUFA1O15239 KRT17P1-201ENST00000399211 1546 ntBASIC12.94□□□□□ -0.34
NDUFA1O15239 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC12.94□□□□□ -0.34
NDUFA1O15239 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFA1O15239 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFA1O15239 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC12.94□□□□□ -0.34
NDUFA1O15239 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFA1O15239 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
NDUFA1O15239 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFA1O15239 NFIC-211ENST00000641145 8399 ntBASIC12.94□□□□□ -0.34
NDUFA1O15239 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFA1O15239 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFA1O15239 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
NDUFA1O15239 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
NDUFA1O15239 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC12.94□□□□□ -0.34
NDUFA1O15239 AC026271.2-201ENST00000428091 497 ntBASIC12.94□□□□□ -0.34
NDUFA1O15239 AL162430.1-201ENST00000480705 870 ntBASIC12.94□□□□□ -0.34
NDUFA1O15239 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC12.94□□□□□ -0.34
NDUFA1O15239 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC12.94□□□□□ -0.34
NDUFA1O15239 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC12.94□□□□□ -0.34
NDUFA1O15239 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC12.94□□□□□ -0.34
NDUFA1O15239 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFA1O15239 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC12.94□□□□□ -0.34
NDUFA1O15239 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFA1O15239 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFA1O15239 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFA1O15239 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
NDUFA1O15239 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFA1O15239 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
NDUFA1O15239 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
NDUFA1O15239 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
NDUFA1O15239 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFA1O15239 AC067852.2-201ENST00000590513 2313 ntBASIC12.94□□□□□ -0.34
NDUFA1O15239 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFA1O15239 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC12.94□□□□□ -0.34
NDUFA1O15239 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
NDUFA1O15239 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFA1O15239 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC12.93□□□□□ -0.34
NDUFA1O15239 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFA1O15239 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFA1O15239 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFA1O15239 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFA1O15239 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFA1O15239 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFA1O15239 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFA1O15239 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFA1O15239 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFA1O15239 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFA1O15239 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFA1O15239 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
NDUFA1O15239 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFA1O15239 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFA1O15239 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFA1O15239 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFA1O15239 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC12.93□□□□□ -0.34
NDUFA1O15239 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFA1O15239 CALM3-202ENST00000391918 702 ntTSL 2 BASIC12.93□□□□□ -0.34
NDUFA1O15239 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFA1O15239 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC12.93□□□□□ -0.34
NDUFA1O15239 AC093787.1-201ENST00000450396 207 ntBASIC12.93□□□□□ -0.34
NDUFA1O15239 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC12.93□□□□□ -0.34
NDUFA1O15239 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
NDUFA1O15239 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC12.93□□□□□ -0.34
NDUFA1O15239 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFA1O15239 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC12.93□□□□□ -0.34
NDUFA1O15239 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFA1O15239 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFA1O15239 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
NDUFA1O15239 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFA1O15239 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC12.93□□□□□ -0.34
NDUFA1O15239 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFA1O15239 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFA1O15239 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
NDUFA1O15239 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFA1O15239 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC12.93□□□□□ -0.34
NDUFA1O15239 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFA1O15239 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC12.93□□□□□ -0.34
NDUFA1O15239 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
NDUFA1O15239 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFA1O15239 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFA1O15239 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
NDUFA1O15239 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC12.92□□□□□ -0.34
NDUFA1O15239 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
NDUFA1O15239 AC018553.1-201ENST00000616682 1458 ntBASIC12.92□□□□□ -0.34
NDUFA1O15239 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFA1O15239 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC12.92□□□□□ -0.34
NDUFA1O15239 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFA1O15239 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFA1O15239 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC12.92□□□□□ -0.34
NDUFA1O15239 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFA1O15239 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFA1O15239 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFA1O15239 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC12.92□□□□□ -0.34
NDUFA1O15239 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC12.92□□□□□ -0.34
NDUFA1O15239 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFA1O15239 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC12.92□□□□□ -0.34
NDUFA1O15239 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms