Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SLC52A3Q9NQ40 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC52A3Q9NQ40 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC52A3Q9NQ40 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC52A3Q9NQ40 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC52A3Q9NQ40 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.94■□□□□ 0.46
SLC52A3Q9NQ40 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC52A3Q9NQ40 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
SLC52A3Q9NQ40 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.94■□□□□ 0.46
SLC52A3Q9NQ40 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC52A3Q9NQ40 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC52A3Q9NQ40 UNC93B4-201ENST00000505679 747 ntBASIC17.94■□□□□ 0.46
SLC52A3Q9NQ40 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.94■□□□□ 0.46
SLC52A3Q9NQ40 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC52A3Q9NQ40 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.94■□□□□ 0.46
SLC52A3Q9NQ40 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.94■□□□□ 0.46
SLC52A3Q9NQ40 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC52A3Q9NQ40 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC52A3Q9NQ40 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC52A3Q9NQ40 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC52A3Q9NQ40 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC52A3Q9NQ40 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC52A3Q9NQ40 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC52A3Q9NQ40 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC52A3Q9NQ40 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC52A3Q9NQ40 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SLC52A3Q9NQ40 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
SLC52A3Q9NQ40 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC52A3Q9NQ40 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SLC52A3Q9NQ40 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC52A3Q9NQ40 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SLC52A3Q9NQ40 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC52A3Q9NQ40 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC52A3Q9NQ40 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.93■□□□□ 0.46
SLC52A3Q9NQ40 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.93■□□□□ 0.46
SLC52A3Q9NQ40 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC52A3Q9NQ40 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC52A3Q9NQ40 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC52A3Q9NQ40 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SLC52A3Q9NQ40 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC52A3Q9NQ40 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC52A3Q9NQ40 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SLC52A3Q9NQ40 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.93■□□□□ 0.46
SLC52A3Q9NQ40 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC52A3Q9NQ40 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.93■□□□□ 0.46
SLC52A3Q9NQ40 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.93■□□□□ 0.46
SLC52A3Q9NQ40 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.93■□□□□ 0.46
SLC52A3Q9NQ40 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC52A3Q9NQ40 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC52A3Q9NQ40 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SLC52A3Q9NQ40 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC52A3Q9NQ40 KRT8P32-201ENST00000512863 1461 ntBASIC17.93■□□□□ 0.46
SLC52A3Q9NQ40 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC52A3Q9NQ40 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SLC52A3Q9NQ40 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
SLC52A3Q9NQ40 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC52A3Q9NQ40 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC52A3Q9NQ40 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC52A3Q9NQ40 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC52A3Q9NQ40 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC52A3Q9NQ40 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC52A3Q9NQ40 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC52A3Q9NQ40 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC52A3Q9NQ40 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
SLC52A3Q9NQ40 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC52A3Q9NQ40 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC52A3Q9NQ40 AC135776.1-201ENST00000319817 2481 ntBASIC17.92■□□□□ 0.46
SLC52A3Q9NQ40 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC52A3Q9NQ40 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.92■□□□□ 0.46
SLC52A3Q9NQ40 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC52A3Q9NQ40 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.92■□□□□ 0.46
SLC52A3Q9NQ40 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SLC52A3Q9NQ40 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC52A3Q9NQ40 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC52A3Q9NQ40 Z85996.1-201ENST00000494644 937 ntBASIC17.92■□□□□ 0.46
SLC52A3Q9NQ40 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC52A3Q9NQ40 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.92■□□□□ 0.46
SLC52A3Q9NQ40 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.92■□□□□ 0.46
SLC52A3Q9NQ40 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.92■□□□□ 0.46
SLC52A3Q9NQ40 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.92■□□□□ 0.46
SLC52A3Q9NQ40 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC52A3Q9NQ40 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.92■□□□□ 0.46
SLC52A3Q9NQ40 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SLC52A3Q9NQ40 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.92■□□□□ 0.46
SLC52A3Q9NQ40 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC52A3Q9NQ40 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC52A3Q9NQ40 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC52A3Q9NQ40 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.91■□□□□ 0.46
SLC52A3Q9NQ40 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC52A3Q9NQ40 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC52A3Q9NQ40 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC52A3Q9NQ40 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC52A3Q9NQ40 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC52A3Q9NQ40 ESPNP-201ENST00000270691 2015 ntBASIC17.91■□□□□ 0.46
SLC52A3Q9NQ40 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.91■□□□□ 0.46
SLC52A3Q9NQ40 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC52A3Q9NQ40 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC52A3Q9NQ40 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC52A3Q9NQ40 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.91■□□□□ 0.46
SLC52A3Q9NQ40 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms