Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SND1-IT1Q9HBX3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SND1-IT1Q9HBX3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SND1-IT1Q9HBX3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SND1-IT1Q9HBX3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC12.68□□□□□ -0.38
SND1-IT1Q9HBX3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SND1-IT1Q9HBX3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
SND1-IT1Q9HBX3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SND1-IT1Q9HBX3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
SND1-IT1Q9HBX3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SND1-IT1Q9HBX3 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SND1-IT1Q9HBX3 IRX1P1-201ENST00000438849 1838 ntBASIC12.68□□□□□ -0.38
SND1-IT1Q9HBX3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SND1-IT1Q9HBX3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SND1-IT1Q9HBX3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SND1-IT1Q9HBX3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SND1-IT1Q9HBX3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC12.68□□□□□ -0.38
SND1-IT1Q9HBX3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC12.68□□□□□ -0.38
SND1-IT1Q9HBX3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC12.68□□□□□ -0.38
SND1-IT1Q9HBX3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC12.68□□□□□ -0.38
SND1-IT1Q9HBX3 C2orf69P4-201ENST00000565394 541 ntBASIC12.68□□□□□ -0.38
SND1-IT1Q9HBX3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC12.68□□□□□ -0.38
SND1-IT1Q9HBX3 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SND1-IT1Q9HBX3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SND1-IT1Q9HBX3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SND1-IT1Q9HBX3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
SND1-IT1Q9HBX3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SND1-IT1Q9HBX3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC12.68□□□□□ -0.38
SND1-IT1Q9HBX3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SND1-IT1Q9HBX3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SND1-IT1Q9HBX3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SND1-IT1Q9HBX3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SND1-IT1Q9HBX3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SND1-IT1Q9HBX3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC12.68□□□□□ -0.38
SND1-IT1Q9HBX3 ABALON-201ENST00000629058 1903 ntBASIC12.68□□□□□ -0.38
SND1-IT1Q9HBX3 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SND1-IT1Q9HBX3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SND1-IT1Q9HBX3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SND1-IT1Q9HBX3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC12.67□□□□□ -0.38
SND1-IT1Q9HBX3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC12.67□□□□□ -0.38
SND1-IT1Q9HBX3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SND1-IT1Q9HBX3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SND1-IT1Q9HBX3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SND1-IT1Q9HBX3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SND1-IT1Q9HBX3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SND1-IT1Q9HBX3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SND1-IT1Q9HBX3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC12.67□□□□□ -0.38
SND1-IT1Q9HBX3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SND1-IT1Q9HBX3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SND1-IT1Q9HBX3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SND1-IT1Q9HBX3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SND1-IT1Q9HBX3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC12.67□□□□□ -0.38
SND1-IT1Q9HBX3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SND1-IT1Q9HBX3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SND1-IT1Q9HBX3 DBI-210ENST00000542275 757 ntTSL 5 BASIC12.67□□□□□ -0.38
SND1-IT1Q9HBX3 NTF6G-201ENST00000591094 616 ntBASIC12.67□□□□□ -0.38
SND1-IT1Q9HBX3 AL589743.5-201ENST00000616611 1050 ntBASIC12.67□□□□□ -0.38
SND1-IT1Q9HBX3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC12.67□□□□□ -0.38
SND1-IT1Q9HBX3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SND1-IT1Q9HBX3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SND1-IT1Q9HBX3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC12.67□□□□□ -0.38
SND1-IT1Q9HBX3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SND1-IT1Q9HBX3 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SND1-IT1Q9HBX3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SND1-IT1Q9HBX3 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SND1-IT1Q9HBX3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SND1-IT1Q9HBX3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SND1-IT1Q9HBX3 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SND1-IT1Q9HBX3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC12.67□□□□□ -0.38
SND1-IT1Q9HBX3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SND1-IT1Q9HBX3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 AC116351.2-201ENST00000606540 1585 ntBASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms